Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq95 143 2e-29
>seq95
Length=111136
Score = 143 bits (158), Expect = 2e-29
Identities = 201/280 (72%), Gaps = 8/280 (3%)
Strand=Plus/Minus
Query 30009 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30068
||| || ||||| || |||||||| | ||| || ||||||||||| || ||||||
Sbjct 30453 GTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCGTTCCAGGCGCTCATGATGAT 30394
Query 30069 GCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACGGCGTTTTGC-AGCTGATCCA 30124
||||||||| | || |||||| |||| ||| |||| || || ||||| || |
Sbjct 30393 GCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTATCACGTCG----GCGAGCTGGTCGA 30338
Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184
| ||| | || |||||||| ||| | ||| |||| ||||| || || || | |||||
Sbjct 30337 CTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATTCTGCGCCAAAGTGGCGCCACT 30278
Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 30244
|||| |||||||| || |||||||| || | || | |||| || |||| |||| |
Sbjct 30277 GGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTGCGTGAGGCCCAGGCTGTCGA 30218
Query 30245 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30284
||| || | || |||||| | ||||| ||||| || ||
Sbjct 30217 GAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 30178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408614173741424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |