Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq303 132 4e-26
>seq303
Length=27345
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
||||| || || ||||| | || || || || || || ||||| || || | || | |
Sbjct 11710 AAACGCAACACCAAATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGTGTCCGG 11651
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
|||| || | ||||| || || || || | |||||| |||||||| |||||||||||
Sbjct 11650 CCATCCTCGAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCTTCC 11591
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
||||||||||| || ||| ||| | |||| ||||||||||| ||||| || || |||
Sbjct 11590 TTATCTTGAATCTTCGTTTTCACATTGTCTATAGTGTCAGACGACTCCACCTCGAGGGTG 11531
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || || || || | || || || || ||||||||
Sbjct 11530 ATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 11493
Score = 129 bits (142), Expect = 5e-25
Identities = 159/216 (74%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | |||||| || || || || || || ||||||||||||| || | | |||| ||
Sbjct 11474 AACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATCTTC 11415
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
|| |||||||| || || |||| |||||| || ||||| || |||||||| ||||||||
Sbjct 11414 CAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTATCTTG 11355
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||| || ||| || | || | || ||||| | ||||| || || |||| || ||
Sbjct 11354 AATCTTGGTTTTCACGTTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATGGTCTT 11295
Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATGGTTAC 101475
||||| ||||| || || | || | || ||||||
Sbjct 11294 TCCGGTCAAAGTCTTGACGACTA-CATCAGGGTTAC 11260
Score = 123 bits (136), Expect = 2e-23
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
|||||| ||||| || || || || ||||| || |||| || | | | || || | ||
Sbjct 11179 ATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTGCGGCCGTCCTCAAGCTG 11120
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || ||||| |||| ||||||||||||||| || || || || || || ||||| ||
Sbjct 11119 CTTTCCAGCAAAGATCAGACGCTGTTGATCGGGGGGGATCCCCTCCTTGTCCTGAATCTT 11060
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| ||| | || | |||||||| | || || |||||||||| || ||||||||
Sbjct 11059 GGTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 11000
Query 101446 TAAAGTTTTTACAAATATCTGCATGGTT 101473
| ||||| || || || |||||| ||
Sbjct 10999 AAGGGTTTTGACGAAAATTTGCATGATT 10972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396275077205616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |