Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq203 275 1e-68
seq60 131 3e-25
>seq203
Length=54532
Score = 275 bits (304), Expect = 1e-68
Identities = 906/1391 (65%), Gaps = 43/1391 (3%)
Strand=Plus/Plus
Query 212907 GGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAG 212966
|| ||||| | |||||| ||||||| || || | | |||||||| ||| || |||||
Sbjct 6410 GGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAA 6469
Query 212967 GGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCC 213026
||||||| || ||| ||||| ||||||||||| | || || || |||||||| ||
Sbjct 6470 GGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCG 6529
Query 213027 ACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCAGT 213084
| ||| | ||| | | || ||||| ||| | | || || ||| | |||| |
Sbjct 6530 AGCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTG-CTCCTTGAGGCTAT-CCCACT 6587
Query 213085 CCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTT 213144
|||| | |||| ||| |||||||| ||||||||| ||||| | |||||| |
Sbjct 6588 CCCAGAGGTCAGA-AGG--------CTTCACGTCCCACATGTCGAACTGAAGGATGCCCT 6638
Query 213145 TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGG 213204
|||| ||||| | ||| || |||||| || || |||||||||| ||| |
Sbjct 6639 CCGAGGCGGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAG 6698
Query 213205 ACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCT 213264
| || |||||||| | || ||||| |||||||||| | ||||||||| ||| |
Sbjct 6699 AGGCAGTGAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTT 6758
Query 213265 CTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324
| || ||| ||| ||||| || | |||| | ||||| || |||||||| || |
Sbjct 6759 CAGGTGACTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAA 6818
Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGC 213384
|| || |||| ||||| || ||| || | ||||| | |||||| ||||
Sbjct 6819 CACCAATAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGA 6878
Query 213385 AGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGT 213444
|| ||||| |||| ||||| || | || | ||||| | | || | || |
Sbjct 6879 CATCAATGATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGG- 6937
Query 213445 GATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCCA 213498
|| |||||| || || | ||||| | ||||| || | |||||
Sbjct 6938 -----AAGTCGTAGCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCA 6992
Query 213499 GGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGC 213558
|||||| || || ||||| | || | | | |||||| || || || ||||| ||||||
Sbjct 6993 AGTTGCATACAGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGG 7052
Query 213559 TGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGA 213618
|| ||||| || |||| ||||| || || |||| ||| | |||||||||||
Sbjct 7053 AGCTGCGGATTGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGA 7112
Query 213619 GCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGG 213678
||||| | || || ||||| ||||| |||| || | |||||| | | |||
Sbjct 7113 GCATGAAAGGATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTC-TGG 7171
Query 213679 CCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGA 213738
| || ||| ||| | | | | ||| |||| || ||||| | | |
Sbjct 7172 GCACGAATGGTCGCACGACCCTTGCCCTC--ACGCTCATACTTCTCATAGAGAGCCTCAA 7229
Query 213739 ATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGCTCCAG 213797
| || | ||| || | | | |||| || || || ||| ||||| || ||||
Sbjct 7230 ACTCCTCGCCGTAGCAGTCAG-CCAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAA 7288
Query 213798 TCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGG 213857
|| |||| | | ||| | || |||||| || || || | ||| || || ||| |
Sbjct 7289 TCACCGTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAA 7348
Query 213858 TCCCTGG-TCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGAT 213916
|| | | || || || ||| || ||| || |||| ||| || || ||||| |
Sbjct 7349 TCACGAGCTCGGACT-TCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACAC 7407
Query 213917 GTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTG 213973
|| |||||||| ||||||| ||| |||||||| || || || | |||| || |||||
Sbjct 7408 ATCGGCGTGCCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTG 7467
Query 213974 GTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTG 214033
||| || ||||| ||||||| | || || | ||| | | || ||||||
Sbjct 7468 GTCAACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGT 7527
Query 214034 TCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAG--GTTGCTCATGGAGAGCCCT 214091
|||||||| || || || || ||||| | ||| | | | || ||| | ||||
Sbjct 7528 GCCGTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCA-AGCCG- 7585
Query 214092 ATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCC 214151
|| ||||| || ||||||||||||||||||| | | | || || |||||| |
Sbjct 7586 ATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCG 7645
Query 214152 ATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGA--CGAGC 214209
|||||||| || | | || | | |||||| ||| |||| | | | || | ||
Sbjct 7646 ATGCTGTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCT--GACATTGAGGTGTGC 7703
Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269
||| |||||| || ||||| |||||| | | | ||| | || | ||| |||||
Sbjct 7704 CAGCGTTGAAGAGTGTGGGCGAGGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGG 7763
Query 214270 TCTCCAGGACT 214280
| |||||||||
Sbjct 7764 TTTCCAGGACT 7774
>seq60
Length=156840
Score = 131 bits (144), Expect = 3e-25
Identities = 344/511 (67%), Gaps = 23/511 (5%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
||| || || || |||| ||||||||||| |||||||| || |||| |||||||||||
Sbjct 139704 CTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTCTC 139763
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCC-AGCA 47957
||||||| || || |||| || ||||||||| | || ||| | | ||||
Sbjct 139764 CATGAAGTCAAAAGGATTGGCCGTCTTATACACCT-TCTCGTTACCAAGAGCAACGAGCA 139822
Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017
|| |||| || || |||| ||||| | ||| | ||| |||||||| | || |
Sbjct 139823 GGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCATTCATGCCCAGTAGAG 139882
Query 48018 ACACG-GGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076
||| |||||||||| || |||||||| | ||| || || || || | ||||
Sbjct 139883 -CACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGCATCTGTAATAATC 139941
Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTT---GGCATAG---AGCATG 48130
|| | ||| || | || | || | ||||||| | | || |||| |
Sbjct 139942 TGTT-------GGA-TCATCTGCTTGCTGGCTC-GGTGCTTCAAGTGAGAGTGCAGCAAG 139992
Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190
||||||||||| |||||||||| || || || ||| | ||||||||||| ||||
Sbjct 139993 CAGGCAAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAAGGTGAGA 140052
Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250
|| ||||| | || | || || |||||||| || | || |||| || ||||||
Sbjct 140053 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCTGAAGAAA 140112
Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTT-GTC-TG 48308
|| || ||||| || || || || | | || |||| | | ||||| ||| ||
Sbjct 140113 ATACCTTCCACAGCAGCAAAAGCAACCAAGCGCTGGGCGAA-GCTGGATTCTTTGTCCTG 140171
Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339
| |||||| | ||||| |||||||||||
Sbjct 140172 A-ATCCAGCGGATAGCCCATTCTGCCTTCTT 140201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931524788817920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |