Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq203 316 2e-81 seq48 95.1 1e-14 >seq203 Length=54532 Score = 316 bits (350), Expect = 2e-81 Identities = 1124/1730 (65%), Gaps = 41/1730 (2%) Strand=Plus/Minus Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278 ||||| | ||||| || || |||| ||| || || | ||||| ||| |||| | Sbjct 7823 ACATGATTATGCGTGTTGCTGTCGGTATCTGGGGAGACAATATTGAGCGAGTCCTGGAAA 7764 Query 75279 CATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGC 75336 | ||| | |||||| ||| | | | || || || | || || |||||||| || Sbjct 7763 CCTACCATCTCATGTCCAGCAAACTCTTTACA--CATGCCTCGCCCACACTCTTCAACGC 7706 Query 75337 TGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 75396 ||| ||||| | ||| |||| ||||||||| | | || ||||||||| || Sbjct 7705 TGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAGCAT 7646 Query 75397 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 75456 | | || ||||||| || || | | || || ||||| ||| |||||| ||||| Sbjct 7645 CGAAGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGGTAT 7586 Query 75457 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCA 75516 || || | |||| | | | |||| | ||| ||| || || || || Sbjct 7585 CGGCTTGAATGTCCACCGTATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGGCAC 7526 Query 75517 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCA 75576 || ||||| | ||||| |||||||| || || ||| ||| || | ||||| | || Sbjct 7525 GTCCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGACCA 7466 Query 75577 AGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATA 75632 | | ||| | || | ||| ||| || | |||||||| || ||||| |||||| Sbjct 7465 GG-GTGGCAACAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGCCGATG 7407 Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATC 75692 | | ||||||||||| || ||| ||||| ||| | ||||| | || | | ||| Sbjct 7406 TGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCGTGATT 7347 Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752 | || | || |||||||| || |||||||||||||| || || || ||| | | Sbjct 7346 TATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGGTGATT 7287 Query 75753 GGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTT 75811 || |||| | || || || || || || || || | ||| || ||||||||| Sbjct 7286 GGACTCTGATGTGCCCCAACGAATGCCCC-GGCCTGGCTGACTGCTACGGCGAGGAGTTT 7228 Query 75812 GAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCC 75871 || || ||||| |||||||| ||||| | | |||||| | | ||| | Sbjct 7227 GAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAGGGTCGTGCGACCATTCGTGCC-CA 7169 Query 75872 GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTA 75930 || | | ||| | | || || || | ||||| ||||| || | || | ||||| || Sbjct 7168 GAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATGCTCTA 7109 Query 75931 CAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAA 75990 ||||||||| ||||||| ||||| || || ||||| |||||||||||| ||||| || Sbjct 7108 CAAGGATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGCTCCAA 7049 Query 75991 TCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGC 76050 || |||||||||||| | |||||| | | |||||| ||||| ||||| ||||| Sbjct 7048 CCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAACTTGGC 6989 Query 76051 ATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTGATTATGAAAA 76107 || | || || || | ||| | | | ||| ||| | || | | || Sbjct 6988 CTCTCTGGCTCTGCCCGCCTTTGTTGACTACAACGAGGGACGC---TACGACTTCCAGAA 6932 Query 76108 ACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTT 76167 ||||| || |||| || | ||| || || ||| || ||||||| || Sbjct 6931 GCTTCACGAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAACCA 6872 Query 76168 TTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGT 76227 || ||||| || || ||||| || ||||||||| ||||||||||| | || || Sbjct 6871 CTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGGCGT 6812 Query 76228 TCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAA 76287 || |||||||| || | || || | ||| |||| || ||| ||||||| Sbjct 6811 CCAGGGTCTCGCTGACGCTTTCCTTGCCTTGCGCATGCCATTCGAGTCACCTGAAGCCCG 6752 Query 76288 GGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGA 76347 ||| | || | || ||||| ||||| ||||| || |||| || | || Sbjct 6751 TGAGCTCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTCTCGA 6692 Query 76348 ATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGT 76407 |||||| | | || || |||| | || || |||| |||||||| || | || | Sbjct 6691 ATTGGCCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGGCAT 6632 Query 76408 GCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTACGACTGGGATGTTCTC 76465 |||||||| || ||||||| | ||||| || || | || || |||||| ||| Sbjct 6631 CCTTCAGTTCGACATGTGGG-ACGTGAAGCC-TTCTGACCTCTGGGAGTGGGATAGCCTC 6574 Query 76466 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAA 76523 ||||| | ||||||||| | || |||| ||| || || || | || || ||||| | Sbjct 6573 AAGGAGCAGATCAAGGAGCATGGGATTCGCAAC--TCATTGCTGCTCGCCCCCATGCCTA 6516 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583 | || || ||| | || || ||||||| ||||| ||||| || || ||||| | |||| Sbjct 6515 CGGCTTCTACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCAACA 6456 Query 76584 TCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATG 76643 | |||| | | | ||| |||||||| || ||||||| || |||| | Sbjct 6455 TTTACCAGCGCCGTGTCCTGGCAGGTGAATTCCAGGTTGTCAATCCCTGGCTACTCAAAG 6396 Query 76644 ACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TCA-TGGTGAAAGCG 76699 | ||| | || || || ||||| | | |||||| ||| ||| || || | | Sbjct 6395 ATCTCGTCGACATGGGCCTTTGGTCTGATGCGATGAAGAATCGTATCATTGCCGAGAAC- 6337 Query 76700 GGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACA 76759 ||||| ||||| || ||| | ||||||| | |||||||| ||||||| || Sbjct 6336 ---GGTTCTATTCAGAACATCCCCAATATCCCGGCCGATATCAAAGCTCTCTACAAAACT 6280 Query 76760 GTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 76817 || ||||||| || | | | | ||| | | ||||| || || |||||| |||| Sbjct 6279 GTTTGGGAAATTTCTCAACG--ACACGTCGTGCAGATGGCTGCTGACCGTGGTGCTTTCA 6222 Query 76818 TTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 76877 |||| || ||| | || | |||| | ||| || ||| |||| || ||| Sbjct 6221 TTGACCAGTCCCAATCCCTCAACATTCACATGAAGGATCCCACCATGGGCAAGATCACTT 6162 Query 76878 CTATGCATATGTAC-GCGTGGAAACAGGGGCTCAAAACCGGAATGTACTA 76926 | ||||| | ||| | ||||| | || ||||| || || |||||||| Sbjct 6161 CCATGCA-CTTTACTGGCTGGAAGCTAGGTCTCAAGACGGGCATGTACTA 6113 >seq48 Length=174106 Score = 95.1 bits (104), Expect = 1e-14 Identities = 297/449 (66%), Gaps = 22/449 (5%) Strand=Plus/Plus Query 175243 TTTCTCAAGCAACCCGAGAGATATTTTG-GAAGT--GGTGCCAAGATCCCCCGAGGCGCC 175299 |||||||| || || |||| | |||| |||| || |||||||| || || ||||| Sbjct 93306 TTTCTCAAACAGCCTGAGA---AGTTTGAGAAGCTAGGGGCCAAGATTCCTCGCGGCGCT 93362 Query 175300 CTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAA 175359 | |||||||| |||||||| || || || || || ||| ||||| || |||||| Sbjct 93363 ATCCTCGCGGGACCTCCAGGTACTGGCAAAACGCTTCTTGCCAAAGCCACGGCAGGTGAA 93422 Query 175360 TCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGATGTTTGTTGGTG 175417 || ||| || ||| || || | | || | | | || || || ||||||||||||| Sbjct 93423 TCTGGTGTTCCGTTCTTC-AGCG-TAAGCGGTTCCGAATTCGTAGAAATGTTTGTTGGTG 93480 Query 175418 TGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTG 175477 | ||| | | |||| || ||||| || | | ||| | ||| ||| || || Sbjct 93481 TTGGTCCTTCACGGGTCCGAGATCTTTTCGCCGAGGGTCGCAAGAATGCACCCTGCATCA 93540 Query 175478 TCTTCATTGATGAGATTGATGCGGTGGGCA-AG-----CAACGCAGCGCTGGTGGTATGC 175531 |||||||||| || || ||||| | || | || ||| |||| | || | Sbjct 93541 TCTTCATTGACGAAATAGATGCCATTGGTAGAGCTCGTCAAGAAAGCGGACGAGGCTTCG 93600 Query 175532 CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTG 175591 | || || ||| ||||| ||| | ||||| | || || || ||||| || || Sbjct 93601 GTGGCAACGATGAGCGAGAAGCTACATTGAATCAGATTCTGACAGAAATGGACGGATTCA 93660 Query 175592 ACAAT-GAGACTGGCA--TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATG 175648 ||| | | || ||| |||| || | || | ||| || || | |||||||| ||| Sbjct 93661 ACACTCGTGA---GCAAGTTGTCGTGCTGGCTGGCACCAACCGAGCCGATATCCTCGATA 93717 Query 175649 ACGCCCTCCTTCGCCCGGGTCGTTTTGAT 175677 | || ||| | || || || ||||||||| Sbjct 93718 AGGCTCTCATGCGTCCCGGCCGTTTTGAT 93746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564469501440