Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq203 316 2e-81
seq48 95.1 1e-14
>seq203
Length=54532
Score = 316 bits (350), Expect = 2e-81
Identities = 1124/1730 (65%), Gaps = 41/1730 (2%)
Strand=Plus/Minus
Query 75219 ACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGA 75278
||||| | ||||| || || |||| ||| || || | ||||| ||| |||| |
Sbjct 7823 ACATGATTATGCGTGTTGCTGTCGGTATCTGGGGAGACAATATTGAGCGAGTCCTGGAAA 7764
Query 75279 CATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGC 75336
| ||| | |||||| ||| | | | || || || | || || |||||||| ||
Sbjct 7763 CCTACCATCTCATGTCCAGCAAACTCTTTACA--CATGCCTCGCCCACACTCTTCAACGC 7706
Query 75337 TGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 75396
||| ||||| | ||| |||| ||||||||| | | || ||||||||| ||
Sbjct 7705 TGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAGCAT 7646
Query 75397 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 75456
| | || ||||||| || || | | || || ||||| ||| |||||| |||||
Sbjct 7645 CGAAGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGGTAT 7586
Query 75457 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCA 75516
|| || | |||| | | | |||| | ||| ||| || || || ||
Sbjct 7585 CGGCTTGAATGTCCACCGTATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGGCAC 7526
Query 75517 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCA 75576
|| ||||| | ||||| |||||||| || || ||| ||| || | ||||| | ||
Sbjct 7525 GTCCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGACCA 7466
Query 75577 AGCGGGGCGTC--GCAAGG-GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATA 75632
| | ||| | || | ||| ||| || | |||||||| || ||||| ||||||
Sbjct 7465 GG-GTGGCAACAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGCCGATG 7407
Query 75633 TCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATC 75692
| | ||||||||||| || ||| ||||| ||| | ||||| | || | | |||
Sbjct 7406 TGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCGTGATT 7347
Query 75693 TCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAAT 75752
| || | || |||||||| || |||||||||||||| || || || ||| | |
Sbjct 7346 TATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGGTGATT 7287
Query 75753 GGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTT 75811
|| |||| | || || || || || || || || | ||| || |||||||||
Sbjct 7286 GGACTCTGATGTGCCCCAACGAATGCCCC-GGCCTGGCTGACTGCTACGGCGAGGAGTTT 7228
Query 75812 GAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCC 75871
|| || ||||| |||||||| ||||| | | |||||| | | ||| |
Sbjct 7227 GAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAGGGTCGTGCGACCATTCGTGCC-CA 7169
Query 75872 GATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTA 75930
|| | | ||| | | || || || | ||||| ||||| || | || | ||||| ||
Sbjct 7168 GAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATGCTCTA 7109
Query 75931 CAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAA 75990
||||||||| ||||||| ||||| || || ||||| |||||||||||| ||||| ||
Sbjct 7108 CAAGGATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGCTCCAA 7049
Query 75991 TCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGC 76050
|| |||||||||||| | |||||| | | |||||| ||||| ||||| |||||
Sbjct 7048 CCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAACTTGGC 6989
Query 76051 ATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACTTTTGATTATGAAAA 76107
|| | || || || | ||| | | | ||| ||| | || | | ||
Sbjct 6988 CTCTCTGGCTCTGCCCGCCTTTGTTGACTACAACGAGGGACGC---TACGACTTCCAGAA 6932
Query 76108 ACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTT 76167
||||| || |||| || | ||| || || ||| || ||||||| ||
Sbjct 6931 GCTTCACGAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAACCA 6872
Query 76168 TTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGT 76227
|| ||||| || || ||||| || ||||||||| ||||||||||| | || ||
Sbjct 6871 CTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGGCGT 6812
Query 76228 TCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAA 76287
|| |||||||| || | || || | ||| |||| || ||| |||||||
Sbjct 6811 CCAGGGTCTCGCTGACGCTTTCCTTGCCTTGCGCATGCCATTCGAGTCACCTGAAGCCCG 6752
Query 76288 GGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGA 76347
||| | || | || ||||| ||||| ||||| || |||| || | ||
Sbjct 6751 TGAGCTCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTCTCGA 6692
Query 76348 ATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGT 76407
|||||| | | || || |||| | || || |||| |||||||| || | || |
Sbjct 6691 ATTGGCCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGGCAT 6632
Query 76408 GCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT--CAACTACGACTGGGATGTTCTC 76465
|||||||| || ||||||| | ||||| || || | || || |||||| |||
Sbjct 6631 CCTTCAGTTCGACATGTGGG-ACGTGAAGCC-TTCTGACCTCTGGGAGTGGGATAGCCTC 6574
Query 76466 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAA 76523
||||| | ||||||||| | || |||| ||| || || || | || || ||||| |
Sbjct 6573 AAGGAGCAGATCAAGGAGCATGGGATTCGCAAC--TCATTGCTGCTCGCCCCCATGCCTA 6516
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
| || || ||| | || || ||||||| ||||| ||||| || || ||||| | ||||
Sbjct 6515 CGGCTTCTACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCAACA 6456
Query 76584 TCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATG 76643
| |||| | | | ||| |||||||| || ||||||| || |||| |
Sbjct 6455 TTTACCAGCGCCGTGTCCTGGCAGGTGAATTCCAGGTTGTCAATCCCTGGCTACTCAAAG 6396
Query 76644 ACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATC---TCA-TGGTGAAAGCG 76699
| ||| | || || || ||||| | | |||||| ||| ||| || || | |
Sbjct 6395 ATCTCGTCGACATGGGCCTTTGGTCTGATGCGATGAAGAATCGTATCATTGCCGAGAAC- 6337
Query 76700 GGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACA 76759
||||| ||||| || ||| | ||||||| | |||||||| ||||||| ||
Sbjct 6336 ---GGTTCTATTCAGAACATCCCCAATATCCCGGCCGATATCAAAGCTCTCTACAAAACT 6280
Query 76760 GTGTGGGAAA--TCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCA 76817
|| ||||||| || | | | | ||| | | ||||| || || |||||| ||||
Sbjct 6279 GTTTGGGAAATTTCTCAACG--ACACGTCGTGCAGATGGCTGCTGACCGTGGTGCTTTCA 6222
Query 76818 TTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTT 76877
|||| || ||| | || | |||| | ||| || ||| |||| || |||
Sbjct 6221 TTGACCAGTCCCAATCCCTCAACATTCACATGAAGGATCCCACCATGGGCAAGATCACTT 6162
Query 76878 CTATGCATATGTAC-GCGTGGAAACAGGGGCTCAAAACCGGAATGTACTA 76926
| ||||| | ||| | ||||| | || ||||| || || ||||||||
Sbjct 6161 CCATGCA-CTTTACTGGCTGGAAGCTAGGTCTCAAGACGGGCATGTACTA 6113
>seq48
Length=174106
Score = 95.1 bits (104), Expect = 1e-14
Identities = 297/449 (66%), Gaps = 22/449 (5%)
Strand=Plus/Plus
Query 175243 TTTCTCAAGCAACCCGAGAGATATTTTG-GAAGT--GGTGCCAAGATCCCCCGAGGCGCC 175299
|||||||| || || |||| | |||| |||| || |||||||| || || |||||
Sbjct 93306 TTTCTCAAACAGCCTGAGA---AGTTTGAGAAGCTAGGGGCCAAGATTCCTCGCGGCGCT 93362
Query 175300 CTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAA 175359
| |||||||| |||||||| || || || || || ||| ||||| || ||||||
Sbjct 93363 ATCCTCGCGGGACCTCCAGGTACTGGCAAAACGCTTCTTGCCAAAGCCACGGCAGGTGAA 93422
Query 175360 TCAAATGTCCCATTCATCCAGTGCTCTGCCG--CAAACTTTGTGGAGATGTTTGTTGGTG 175417
|| ||| || ||| || || | | || | | | || || || |||||||||||||
Sbjct 93423 TCTGGTGTTCCGTTCTTC-AGCG-TAAGCGGTTCCGAATTCGTAGAAATGTTTGTTGGTG 93480
Query 175418 TGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTG 175477
| ||| | | |||| || ||||| || | | ||| | ||| ||| || ||
Sbjct 93481 TTGGTCCTTCACGGGTCCGAGATCTTTTCGCCGAGGGTCGCAAGAATGCACCCTGCATCA 93540
Query 175478 TCTTCATTGATGAGATTGATGCGGTGGGCA-AG-----CAACGCAGCGCTGGTGGTATGC 175531
|||||||||| || || ||||| | || | || ||| |||| | || |
Sbjct 93541 TCTTCATTGACGAAATAGATGCCATTGGTAGAGCTCGTCAAGAAAGCGGACGAGGCTTCG 93600
Query 175532 CAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTG 175591
| || || ||| ||||| ||| | ||||| | || || || ||||| || ||
Sbjct 93601 GTGGCAACGATGAGCGAGAAGCTACATTGAATCAGATTCTGACAGAAATGGACGGATTCA 93660
Query 175592 ACAAT-GAGACTGGCA--TTGTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATG 175648
||| | | || ||| |||| || | || | ||| || || | |||||||| |||
Sbjct 93661 ACACTCGTGA---GCAAGTTGTCGTGCTGGCTGGCACCAACCGAGCCGATATCCTCGATA 93717
Query 175649 ACGCCCTCCTTCGCCCGGGTCGTTTTGAT 175677
| || ||| | || || || |||||||||
Sbjct 93718 AGGCTCTCATGCGTCCCGGCCGTTTTGAT 93746
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564469501440
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