Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq60 109 8e-19
seq303 89.7 8e-13
>seq60
Length=156840
Score = 109 bits (120), Expect = 8e-19
Identities = 196/286 (69%), Gaps = 3/286 (1%)
Strand=Plus/Plus
Query 18422 TCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCT 18481
|| || || || ||||||||||| | ||| || |||| || || ||| | |||||
Sbjct 140316 TCCTTGATGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATG 140375
Query 18482 ATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCT 18541
||||| || | ||||| | | |||||| || ||| | || | || | ||
Sbjct 140376 ATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCA 140435
Query 18542 ACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATG 18601
||||| ||||| || || || ||||| | || || |||||||||| | | |||
Sbjct 140436 ACCAAGTTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATG 140495
Query 18602 AAATGTTTTTCATTATCCTTGAGA---TTGTTCCATTCATCTATATCTTTTGATAGATCA 18658
|| | ||| || | ||| || ||| |||||||| || | | ||||||||| |||||
Sbjct 140496 AAGTATTTCTCGTCATCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCG 140555
Query 18659 ACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704
| ||||| | ||||| || || | ||||||| |||||||||||
Sbjct 140556 ATCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTT 140601
>seq303
Length=27345
Score = 89.7 bits (98), Expect = 8e-13
Identities = 133/189 (70%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 155838 AAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAAC 155897
|| || ||||| ||||| || || || | || || || |||||||| || |||
Sbjct 11280 AAGACTTTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGACAAC 11339
Query 155898 GTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTAT 155957
||||||| || || |||||||| |||||||| ||||| || || || | ||||||
Sbjct 11340 GTGAAAACCAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTGATTTTC 11399
Query 155958 GCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCG 156017
|| ||||||||||| |||||| | | || | | ||||| || || || ||| |
Sbjct 11400 GCTGGTAAGCAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAGAAGGAGTCC 11459
Query 156018 ACGCTTCAT 156026
|| ||||||
Sbjct 11460 ACACTTCAT 11468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731865705900800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |