Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq203 149 8e-30
seq14 96.9 4e-14
seq44 91.5 2e-12
>seq203
Length=54532
Score = 149 bits (164), Expect = 8e-30
Identities = 189/260 (73%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| || || | || |||| ||| || || || |||||||| | || || |||||
Sbjct 7465 CTGGTCAACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGA 7524
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| |||||||||||| || | ||| | ||| | |||||| | ||| | |||||
Sbjct 7525 CGTGCCGTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCC 7584
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || || ||| ||||||||| | ||||| ||||||||||| |||||||| ||
Sbjct 7585 GATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTC 7644
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||| |||||||||| ||||| ||||| ||||| || || | |||||
Sbjct 7645 GATGCTGTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCC 7704
Query 1630305 GGCGTTGAAGAGCGTGGGCG 1630324
||||||||||| |||||||
Sbjct 7705 AGCGTTGAAGAGTGTGGGCG 7724
>seq14
Length=324671
Score = 96.9 bits (106), Expect = 4e-14
Identities = 82/101 (81%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 1592192 AACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATC 1592251
|| ||||| ||||| || ||||| || ||| |||| ||||| | || ||||||||||||
Sbjct 214825 AATTACCTTGACATTAAACCTCTTCTTGATGTTGGCTGCAAAACCGTTGCCAACATGATC 214766
Query 1592252 AAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACAT 1592292
||||||||||| || || || || || ||||| ||||||||
Sbjct 214765 AAGGGCAAGTCACCTGAAGAAATTCGAAAGACTTTTAACAT 214725
>seq44
Length=178107
Score = 91.5 bits (100), Expect = 2e-12
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 1574059 TGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGG 1574118
|||| ||||| || |||||| | || ||||||||||| || ||| || | ||||| | |
Sbjct 57291 TGCCTCCCGGCCGACACAAGCTCATTATCCTCGACGAAGCAGACAGCATGACGTCCGGTG 57232
Query 1574119 CCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGG 1574178
| || || || || || || ||||||| | ||||||| || || ||||| | |
Sbjct 57231 CGCAACAAGCACTTCGCCGAACTATGGAAATTTATTCCAACACAACTCGATTTGCGTTTG 57172
Query 1574179 CGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCT 1574238
| |||||| |||| | | | |||||| | || ||| || || |||||||||||||
Sbjct 57171 CCTGCAACCAGTCGAACAAGATTATCGAGCCACTTCAATCGCGATGTGCCATTCTGCGCT 57112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107082739498096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |