Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq303 125 6e-24
>seq303
Length=27345
Score = 125 bits (138), Expect = 6e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || ||||| || || | |
Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| |||| | || ||| ||||| ||||| || ||||| || |||||||||||
Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| || || || ||||| |||||| | || || || |||| || ||
Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTG-CAGACTACAA 11671
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || | || ||||||||||| ||||| || ||
Sbjct 11672 CATCCAGAAGGAGTCAACTTTGCATTTGGTGTTGCGTTTGCGTGGTGG 11719
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/208 (70%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| || ||||| || || || || || || || || | |
Sbjct 10976 ATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 11035
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || || |||||||||
Sbjct 11036 GACACCATCGACAATGTCAAGACCAAGATTCAGGACAAGGAGGGGATCCCCCCCGATCAA 11095
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||||||||| || || ||||| ||||| | | | | |||| || |||
Sbjct 11096 CAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAAC 11155
Query 24884 ATTCAAAAGGAATCGACACTACA-CTTG 24910
||||| ||||| || || || || ||||
Sbjct 11156 ATTCAGAAGGAGTCTACTCTTCATCTTG 11183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893730880640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |