Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq203 127 3e-23
seq60 89.7 8e-12
seq14 87.8 3e-11
>seq203
Length=54532
Score = 127 bits (140), Expect = 3e-23
Identities = 184/260 (71%), Gaps = 0/260 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||| ||||| | || |||| ||| || || || |||||||| | | || |||||
Sbjct 7465 CTGGTCAACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGA 7524
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| |||||||||||| || | ||| | ||| | |||||| | ||| | |||||
Sbjct 7525 CGTGCCGTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCC 7584
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
||| || || ||| ||||||||| | ||||| | || ||||| || |||||||| ||
Sbjct 7585 GATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTC 7644
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||||||||| | || ||||| ||||| || | | |||||
Sbjct 7645 GATGCTGTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCC 7704
Query 2073780 GGCATTGAAGAGCGTGGGCG 2073799
|| |||||||| |||||||
Sbjct 7705 AGCGTTGAAGAGTGTGGGCG 7724
>seq60
Length=156840
Score = 89.7 bits (98), Expect = 8e-12
Identities = 174/255 (68%), Gaps = 4/255 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| |||||| || || ||| ||| || || || |||||||| | |
Sbjct 139691 TGACACCAGCCTTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCA 139750
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCC-- 794008
||||| |||||| | || || ||||||||| || ||||||| ||
Sbjct 139751 ATGAGATGTTCTCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACCAA 139810
Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068
|||| ||| |||||||| ||||| || || ||||||||||| ||| | | ||| ||
Sbjct 139811 GAGCAACG--AGCAGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCATT 139868
Query 794069 CATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||||| | || || |||| | ||| | | |||||||| |||||| ||| ||
Sbjct 139869 CATGCCCAGTAGAGCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGC 139928
Query 794129 CTCGATGATGATCTG 794143
|| | || |||||
Sbjct 139929 ATCTGTAATAATCTG 139943
>seq14
Length=324671
Score = 87.8 bits (96), Expect = 3e-11
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 2035653 AACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATC 2035712
|| ||||| ||||| || || || || ||| | || ||||| ||||| |||||| | |||
Sbjct 214825 AATTACCTTGACATTAAACCTCTTCTTGATGTTGGCTGCAAAACCGTTGCCAACATGATC 214766
Query 2035713 AAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACAT 2035753
||||||||||| || || || || || ||||| ||||||||
Sbjct 214765 AAGGGCAAGTCACCTGAAGAAATTCGAAAGACTTTTAACAT 214725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916173214302032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |