Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq303 114 1e-20
seq245 91.5 1e-13
>seq303
Length=27345
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | ||||| || ||||| ||| |||| |||| |
Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | | || ||| |||||| ||||| |||||| | || ||||||
Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | ||||| | || || || ||||| ||||| | | ||| | || |||||||||
Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAAC 11672
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGA 107783
|| || |||||||| || ||||| |||||||| | ||||| || |||
Sbjct 11673 ATCCAGAAGGAGTCAACTTTGCATTTGGTGTTGCGTTTGCGTGGTGGA 11720
>seq245
Length=42083
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||| ||||| ||||| || | || || || || || ||| |||| |||| ||
Sbjct 31650 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCGAGGTGGAGTCT 31709
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| || ||| | | || || ||||| || || || ||| | ||| |||
Sbjct 31710 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 31769
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|||||| |||| || | ||| || || ||||| ||||| | | || |||| ||||||
Sbjct 31770 CAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTAC 31829
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| || |||||| || ||||| ||||| || | |||| || ||
Sbjct 31830 AACATCCAGAAGGAGAGCACTCTGCACTTGGTGCTGCGCCTGCGTGGTGG 31879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398873455418032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |