Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq245 105 5e-18
>seq245
Length=42083
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||||||||| || || ||| || || || ||||| || || || | |||||| |
Sbjct 31867 CGCAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCA 31808
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| || ||||||||| | || | || ||||| ||||| ||||| ||||| |||
Sbjct 31807 TCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 31748
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || ||||| | || | ||||| ||| || || || || || ||
Sbjct 31747 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATC 31688
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| || || || | ||| || || || |||||||| ||
Sbjct 31687 GTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 31650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385215969937008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |