Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq303 104 6e-17
>seq303
Length=27345
Score = 104 bits (114), Expect = 6e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| ||||| || ||||| | || ||||| |||||| || |||| || ||
Sbjct 11289 ACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGACAACGTGAAAACC 11348
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| || || ||| || | || || ||||| || |||
Sbjct 11349 AAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTGATTTTCGCTGGTAAG 11408
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| |||||||||| | || | |||||||||||| ||||||| ||||| || |||||
Sbjct 11409 CAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAGAAGGAGTCCACACTTCAT 11468
Query 206374 CTTGTTTTGAGACTTCG 206390
|||||| | | |||||
Sbjct 11469 CTTGTTCTCCGCCTTCG 11485
Score = 100 bits (110), Expect = 7e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||||||||| || ||||| | || ||||| ||||||
Sbjct 11496 CAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCTGAC 11555
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || || ||||||||||| || ||||| ||| || || ||
Sbjct 11556 ACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAGCAG 11615
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||||||||| ||||||||| | || ||||| |||| | || || |||||| ||
Sbjct 11616 CGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAACATC 11675
Query 206353 CAGAAAGAGTCTACT 206367
||||| ||||| |||
Sbjct 11676 CAGAAGGAGTCAACT 11690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181810382249648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |