Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq303 104 6e-17 >seq303 Length=27345 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || ||||| || ||||| | || ||||| |||||| || |||| || || Sbjct 11289 ACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGACAACGTGAAAACC 11348 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||||||||| || ||||| || || ||| || | || || ||||| || ||| Sbjct 11349 AAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTGATTTTCGCTGGTAAG 11408 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||||||||| | || | |||||||||||| ||||||| ||||| || ||||| Sbjct 11409 CAGCTGGAAGATGGCCGTACGCTCGCCGATTACAACATCCAGAAGGAGTCCACACTTCAT 11468 Query 206374 CTTGTTTTGAGACTTCG 206390 |||||| | | ||||| Sbjct 11469 CTTGTTCTCCGCCTTCG 11485 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||||||||| || ||||| | || ||||| |||||| Sbjct 11496 CAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCTGAC 11555 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || || ||||||||||| || ||||| ||| || || || Sbjct 11556 ACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAGCAG 11615 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| ||||||||| | || ||||| |||| | || || |||||| || Sbjct 11616 CGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAACATC 11675 Query 206353 CAGAAAGAGTCTACT 206367 ||||| ||||| ||| Sbjct 11676 CAGAAGGAGTCAACT 11690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181810382249648