Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq303 116 4e-21
>seq303
Length=27345
Score = 116 bits (128), Expect = 4e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
|||||| ||||| |||||||| | ||||||| || || ||||||||||| | ||
Sbjct 11714 ACGCAAACGCAACACCAAATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGTGT 11655
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| |||||||| || || | |||| |||||||| ||||| ||||| |||||
Sbjct 11654 CCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCC 11595
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||| ||||| ||| || ||||| | || | ||| || | || |||||| ||||
Sbjct 11594 TTCCTTATCTTGAATCTTCGTTTTCACATTGTCTATAGTGTCAGACGACTCCACCTCGAG 11535
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || || || || | ||| ||||||||
Sbjct 11534 GGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 11493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476607101143680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |