Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq95 95.1 1e-14 >seq95 Length=111136 Score = 95.1 bits (104), Expect = 1e-14 Identities = 236/356 (66%), Gaps = 12/356 (3%) Strand=Plus/Minus Query 147106 ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGG 147165 ||||| |||||| | || ||| || || ||||| |||||| | || || || | Sbjct 30473 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 30414 Query 147166 TTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACC 147225 |||||||| | | | |||||| | || || |||| |||| || || Sbjct 30413 TTCCAGGCGCTCATGATGATGCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTAT---- 30358 Query 147226 CACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCT 147281 ||| || |||||||| || |||| ||| ||||| | | | ||| | ||| Sbjct 30357 CACGTCGGCGAGCTGGTCGACTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATTC 30298 Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 || |||||||| | |||||||||||||||||| || ||||||||||| || | ||| Sbjct 30297 TGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTG 30238 Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 || || |||| | | |||||||||| | || |||| | | ||||| || || || Sbjct 30237 CGTGAGGCCCAGGCTGTCGAGAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 30178 Query 147402 --CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 | | || ||| | || ||| |||| |||| |||||||||||| || || Sbjct 30177 GGCGTTGCTGAGGG--CCAGCGAGGACGTGTTGCCCTCGATGAACCAGAGGAGTTC 30124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482982003200