Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq303 140 3e-28
seq245 122 9e-23
seq60 93.3 4e-14
>seq303
Length=27345
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| || || || || || ||||| |||||||||||||| |
Sbjct 11202 CCACCACGGAGGCGGAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCG 11143
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| || || ||||| |||| |||||| |||||||| ||
Sbjct 11142 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGTTGATCGGGGGGG 11083
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || ||||| || ||||| ||| | ||||| || || || ||
Sbjct 11082 ATCCCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATGGTGTCAGATGACTCGACC 11023
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| ||||| ||||| || ||||| | ||||| ||||||||||||||
Sbjct 11022 TCAAGAGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAAATTTGCAT 10976
Score = 127 bits (140), Expect = 2e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||||||| | || | || || ||||| || ||||||||||| ||| || |
Sbjct 11707 CGCAACACCAAATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGTGTCCGGCCA 11648
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| |||||||| || || || || || | ||||||||||||||| || |||||||| ||
Sbjct 11647 TCCTCGAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCTTCCTTA 11588
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|||||||| || ||| || ||| | ||||| ||||| ||||| ||||| || |||
Sbjct 11587 TCTTGAATCTTCGTTTTCACATTGTCTATAGTGTCAGACGACTCCACCTCGAGGGTGATG 11528
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || | || || ||||| || |||||
Sbjct 11527 GTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 11493
>seq245
Length=42083
Score = 122 bits (134), Expect = 9e-23
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| | ||| || ||| ||||| || |||||||||||| | | |||| |
Sbjct 31870 AGGCGCAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 31811
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| |||||||| ||||| ||||| || | |||||||| || || || ||||| ||
Sbjct 31810 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCC 31751
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || ||||| ||||| ||
Sbjct 31750 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 31691
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || | || || |||||||| ||||| |||
Sbjct 31690 ATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 31649
>seq60
Length=156840
Score = 93.3 bits (102), Expect = 4e-14
Identities = 313/471 (66%), Gaps = 26/471 (6%)
Strand=Plus/Plus
Query 21427 TATTCGCCGACCCGTCTTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATA 21486
|| || || || || | |||||||||||||| || || | | || ||||| | |||
Sbjct 139708 TACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTCTCCATG 139767
Query 21487 AAATTAAAAGGATTGCTGGCGTAAAA-ACACCTTTCTTCGTT--CAATTCCA-CGCACAA 21542
|| | |||||||||| | ||| | ||||||| ||||| ||| || || ||
Sbjct 139768 AAGTCAAAAGGATTG--GCCGTCTTATACACCTTC--TCGTTACCAAGAGCAACGAGCAG 139823
Query 21543 ACGATCCGCCACGAATTCAATGTATTGACACATGC-TGTCGCAATTCATGCCCAACAGAT 21601
||||| ||||| || |||||||| || ||| ||| ||| |||||||||| |||
Sbjct 139824 GCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCA-TTCATGCCCAGTAGAG 139882
Query 21602 CGACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCATGG 21661
| || | || || || | |||||| | |||||| | || || || | || ||
Sbjct 139883 CACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGCATCTGTAATAATCT 139942
Query 21662 CGTGTATTTCACCGGCGGACAATTTGTCTTGAGGCTCGATGTATTTGTTGTAGTAGAGAC 21721
|| || || | || | || || | ||| | || || | || | || |
Sbjct 139943 GTTGGAT--CATCTGCTTGC----TGGCTCGGTGCTTCAAGTGAGAGT-GCAGCA-AG-C 139993
Query 21722 AAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGAC 21781
| ||||| | |||||||| ||||| || ||||| || ||||||||| ||| |||||||
Sbjct 139994 AGGCAAAGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAAGGTGAGAC 140053
Query 21782 CGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCG--Gaaaaaaa 21839
||||||| || || || || || | | || || | ||||| |||| ||| ||||
Sbjct 140054 CGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCTGAAGAAAA 140113
Query 21840 CACGCCCTCCACAATGGCGAACGCCACCATGCGCCGCGCCAATTTGCTGGA 21890
| || |||||| || || || |||| |||| | || || ||||||
Sbjct 140114 TA--CCTTCCACAGCAGCAAAAGCAACCAAGCGCTGGGCGAA---GCTGGA 140159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505394053573760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |