Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq72 98.7 8e-16
>seq72
Length=138446
Score = 98.7 bits (108), Expect = 8e-16
Identities = 294/449 (65%), Gaps = 21/449 (5%)
Strand=Plus/Plus
Query 19378 GGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACAAAACAACCTCCCAAAATT 19437
|||||||| || ||||| | | || ||||| | |||| | || ||||| ||
Sbjct 41345 GGAAAAACCTTGATTGCTCGTCAGATTGGTAAAATGCTTAATGCCCGGCCACCCAAGGTT 41404
Query 19438 GTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGT 19497
| |||||||||||| | | || || || || |||||||| ||||| ||| | |||
Sbjct 41405 ATCAATGGTCCTGAAGTACTGAACAAGTACGTGGGTCAATCTGAAGAGAATATCCGAAAG 41464
Query 19498 TTGTTTGCTGACGCTGAAGAAGA--ACAA--AAACGTTTAGGGCG-CAAAAGTTCTTTGC 19552
| ||||| ||||| ||| |||| |||| ||| | |||| ||||| | | |
Sbjct 41465 CTATTTGCAGACGCCGAAAAAGAGTACAAGGAAA-----AAGGCGATGAAAGTAGTCTTC 41519
Query 19553 ACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTC---------TG 19603
|||| || || | || || |||| || | || || || |||||||| ||
Sbjct 41520 ACATCATCATCTTTGACGAGCTGGATGCCGTTTGCAAACAGAGAGGTTCGGGAGCCGGTG 41579
Query 19604 GTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTA 19663
| | || ||| || ||||| ||| || || || || || || || | || || |||
Sbjct 41580 GCGGAACTGGCGTCGGTGACAGTGTCGTGAACCAGCTGCTTTCCAAGCTTGATGGCGTTG 41639
Query 19664 ACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCG 19723
| || || || || || | | || || ||||| || | || | || ||| |
Sbjct 41640 ATCAGCTTAACAACATCCTGCTGATAGGAATGACCAACCGGAAAGACATGATTGACGATG 41699
Query 19724 C-CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782
| || || | |||| || || || ||| | | |||||||| | | |||||||| |
Sbjct 41700 CGCTCATGA-GACCAGGCCGTTTAGAAGTCCATCTCGAAATTTCCCTGCCCGATGAGCCT 41758
Query 19783 GGACGTGTGGAAATTTTAAACATACATAC 19811
|||||| | |||||||| || ||||||||
Sbjct 41759 GGACGTCTCGAAATTTTCAAGATACATAC 41787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397452667331440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |