Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq203 297 2e-75
seq48 95.1 2e-14
>seq203
Length=54532
Score = 297 bits (328), Expect = 2e-75
Identities = 1123/1732 (65%), Gaps = 45/1732 (3%)
Strand=Plus/Plus
Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGC-GTACATATGCATAGAAGAGAGCTT 110427
|||||||| || |||||||| ||| | ||||| | ||| | ||||| |||| || |||
Sbjct 6113 TAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAG-TGCATGGAAGTGATCTT 6171
Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487
| ||| || ||| | |||| | ||| | ||| ||||||||||| ||
Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231
Query 110488 CCGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545
|| | || ||||| | | ||| | | || | |||||||||||| || |||
Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTGTCGTTGAGA--AATTTCCCAAACAGTTTTGTAG 6289
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
||| |||||||| | ||||||| | ||| ||||| || ||||| | | |
Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTCGGCAATG 6349
Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665
|| ||| |||||| | | ||||| || || || | ||| || |||| ||
Sbjct 6350 ATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGCCAG 6409
Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725
||||||| || |||||||| ||| | | | |||| ||||| | |||||
Sbjct 6410 GGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAA 6469
Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785
|| || ||||| ||||| ||||||| || || | ||| || || || ||||| || ||
Sbjct 6470 GGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCG 6529
Query 110786 ATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT 110843
| || || || ||| |||| || | ||||||||| | |||||||| |||||| |
Sbjct 6530 AGCAGCAATGA--GTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACT 6587
Query 110844 CGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901
| || | || || ||||| | |||||||||| |||||||| | || | || ||
Sbjct 6588 CCCAGAGGTCAGAA-GGCTTCACGT-CCCACATGTCGAACTGAAGGATGCCCTCCGAGGC 6645
Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCT 110960
|||||| |||| || || | |||| || || | | |||||||| | || ||
Sbjct 6646 GGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAG-GCAG 6704
Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020
|||| || ||||| ||||| ||||| || | || | ||| ||||||| ||
Sbjct 6705 TGAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTG 6764
Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080
| || |||| ||| | || || | || |||||||| || || || | |||||
Sbjct 6765 ACTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAA 6824
Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140
|||||| ||||||||| || ||||| || || ||||| || || ||||
Sbjct 6825 TAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAA 6884
Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 111200
||| || ||| || || ||| | || |||| || ||||| || | | ||
Sbjct 6885 TGATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGT 6944
Query 111201 AAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAA 111257
| ||| ||| | | | ||| | || || || | || ||||| ||||| |
Sbjct 6945 A---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATA 7001
Query 111258 CAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAA 111317
|||| |||||| | | |||||| | |||||| || || | |||||| || |
Sbjct 7002 CAGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGA 7061
Query 111318 TCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGG 111377
| || ||||| ||||| || || ||||| |||| || |||||||||||||||||| | |
Sbjct 7062 TTGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAG 7121
Query 111378 GCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACA 111436
| | |||||||| ||||| | || || || | | ||| | | || | ||| | |
Sbjct 7122 GATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-GGCACG---A 7177
Query 111437 ATGG-CGTTGGCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493
|||| || | || | ||||| ||| ||||| ||||| || |||||||||||
Sbjct 7178 ATGGTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCG 7237
Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACC 111552
|| ||| | || || || || || || || || | |||| ||| | |||
Sbjct 7238 CCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTT 7296
Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 111612
| || || |||||||||||||| || |||||||| || | || | ||| | |
Sbjct 7297 CTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGC 7356
Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 111672
|| | ||||| | ||| ||||| ||| || ||||||||||| | | ||| |||||
Sbjct 7357 TCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTG 7416
Query 111673 CCATGGCT-CAAG---ATAG--ACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTAC 111726
||| |||| |||| || | | ||| || || ||| | | ||| | || | ||
Sbjct 7417 CCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTT--GTTG-CCACCCTGGTCAAC 7473
Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786
||| | || ||| ||| || || |||||||| ||||| | ||||| || || ||
Sbjct 7474 ATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTT 7533
Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846
|| || ||| ||| | |||| | | | |||| | || || ||||| ||
Sbjct 7534 GGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCACC 7593
Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906
|||| ||| ||||| || || | | || || ||||||| || | ||| |||
Sbjct 7594 AGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTC 7653
Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966
|||||| || | | ||||||||| |||| ||| | ||||| ||||| |||||
Sbjct 7654 CTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAA 7713
Query 111967 GAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAG 112024
||| || || | || || || | | | ||| |||||| | ||| || |||| |
Sbjct 7714 GAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGG 7771
Query 112025 ACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076
|| ||||| | || || ||| |||| || || ||||| | |||||
Sbjct 7772 ACTCGCTCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGT 7823
>seq48
Length=174106
Score = 95.1 bits (104), Expect = 2e-14
Identities = 297/449 (66%), Gaps = 22/449 (5%)
Strand=Plus/Minus
Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511
||||||||| || || || | ||| || | ||| |||||||| | || || ||| | ||
Sbjct 93746 ATCAAAACGGCCGGGACGCATGAGAGCCTTATCGAGGATATCGGCTCGGTTGGTGCCAGC 93687
Query 11512 AATAACCACAA--TGCCAGTCTC-ATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATT 11568
| || |||| ||| || | | ||| || || ||||| || || || | |||||
Sbjct 93686 CAGCACGACAACTTGC---TCACGAGTGTTGAATCCGTCCATTTCTGTCAGAATCTGATT 93630
Query 11569 AATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTG-----CT-T 11622
| ||| ||||| |||||| || | | || | | || ||| || |
Sbjct 93629 CAATGTAGCTTCTCGCTCATCGTTGCCACCGAAGCCTCGTCCGCTTTCTTGACGAGCTCT 93570
Query 11623 GCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTC 11682
|| | ||||| || || |||||||||| || || ||| ||| | ||| | |
Sbjct 93569 ACCAATGGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGC 93510
Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CG 11740
|| ||||| || |||| | | ||| |||||||||||||| || || || | | |
Sbjct 93509 GAAAAGATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACC 93450
Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800
|| | | || || ||| || ||| |||||||| || ||||| ||| || || ||
Sbjct 93449 GCTTA-CGCT-GAAGAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTT 93392
Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTC 11858
|| || |||||||| |||||||| | ||||| || || |||||||| || ||||
Sbjct 93391 TTGCCAGTACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTC 93332
Query 11859 -CAAAATATCTCTCGGGTTGCTTGAGAAA 11886
|||| | |||| || || ||||||||
Sbjct 93331 TCAAACT---TCTCAGGCTGTTTGAGAAA 93306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026598924800
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