Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq203 297 2e-75 seq48 95.1 2e-14 >seq203 Length=54532 Score = 297 bits (328), Expect = 2e-75 Identities = 1123/1732 (65%), Gaps = 45/1732 (3%) Strand=Plus/Plus Query 110369 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGC-GTACATATGCATAGAAGAGAGCTT 110427 |||||||| || |||||||| ||| | ||||| | ||| | ||||| |||| || ||| Sbjct 6113 TAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAG-TGCATGGAAGTGATCTT 6171 Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487 | ||| || ||| | |||| | ||| | ||| ||||||||||| || Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231 Query 110488 CCGTTGTGCCGCCATATCAATGACAT--CCTTCATCTTAATTTCCCAAACTGTGCGATAG 110545 || | || ||||| | | ||| | | || | |||||||||||| || ||| Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTGTCGTTGAGA--AATTTCCCAAACAGTTTTGTAG 6289 Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605 ||| |||||||| | ||||||| | ||| ||||| || ||||| | | | Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTCGGCAATG 6349 Query 110606 ATGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGC 110665 || ||| |||||| | | ||||| || || || | ||| || |||| || Sbjct 6350 ATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGCCAG 6409 Query 110666 TTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTAT 110725 ||||||| || |||||||| ||| | | | |||| ||||| | ||||| Sbjct 6410 GGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAA 6469 Query 110726 GGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCC 110785 || || ||||| ||||| ||||||| || || | ||| || || || ||||| || || Sbjct 6470 GGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCG 6529 Query 110786 ATCA--AAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGT 110843 | || || || ||| |||| || | ||||||||| | |||||||| |||||| | Sbjct 6530 AGCAGCAATGA--GTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACT 6587 Query 110844 CGTAGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGC 110901 | || | || || ||||| | |||||||||| |||||||| | || | || || Sbjct 6588 CCCAGAGGTCAGAA-GGCTTCACGT-CCCACATGTCGAACTGAAGGATGCCCTCCGAGGC 6645 Query 110902 GGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCT 110960 |||||| |||| || || | |||| || || | | |||||||| | || || Sbjct 6646 GGGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAG-GCAG 6704 Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020 |||| || ||||| ||||| ||||| || | || | ||| ||||||| || Sbjct 6705 TGAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTG 6764 Query 111021 AATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 111080 | || |||| ||| | || || | || |||||||| || || || | ||||| Sbjct 6765 ACTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAA 6824 Query 111081 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 111140 |||||| ||||||||| || ||||| || || ||||| || || |||| Sbjct 6825 TAGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAA 6884 Query 111141 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 111200 ||| || ||| || || ||| | || |||| || ||||| || | | || Sbjct 6885 TGATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGT 6944 Query 111201 AAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAA 111257 | ||| ||| | | | ||| | || || || | || ||||| ||||| | Sbjct 6945 A---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATA 7001 Query 111258 CAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAA 111317 |||| |||||| | | |||||| | |||||| || || | |||||| || | Sbjct 7002 CAGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGA 7061 Query 111318 TCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGG 111377 | || ||||| ||||| || || ||||| |||| || |||||||||||||||||| | | Sbjct 7062 TTGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAG 7121 Query 111378 GCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACA 111436 | | |||||||| ||||| | || || || | | ||| | | || | ||| | | Sbjct 7122 GATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-GGCACG---A 7177 Query 111437 ATGG-CGTTGGCCCGT--CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCA 111493 |||| || | || | ||||| ||| ||||| ||||| || ||||||||||| Sbjct 7178 ATGGTCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCG 7237 Query 111494 CCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACC 111552 || ||| | || || || || || || || || | |||| ||| | ||| Sbjct 7238 CCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTT 7296 Query 111553 TTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACA 111612 | || || |||||||||||||| || |||||||| || | || | ||| | | Sbjct 7297 CTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGC 7356 Query 111613 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 111672 || | ||||| | ||| ||||| ||| || ||||||||||| | | ||| ||||| Sbjct 7357 TCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTG 7416 Query 111673 CCATGGCT-CAAG---ATAG--ACTGCGATAGATCCCTTTCGACGCCCAGCTTGATTTAC 111726 ||| |||| |||| || | | ||| || || ||| | | ||| | || | || Sbjct 7417 CCAAGGCTCCAAGTAAATGGCAAATGCACCAGGTCGCTT--GTTG-CCACCCTGGTCAAC 7473 Query 111727 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 111786 ||| | || ||| ||| || || |||||||| ||||| | ||||| || || || Sbjct 7474 ATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTT 7533 Query 111787 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 111846 || || ||| ||| | |||| | | | |||| | || || ||||| || Sbjct 7534 GGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCACC 7593 Query 111847 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 111906 |||| ||| ||||| || || | | || || ||||||| || | ||| ||| Sbjct 7594 AGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTC 7653 Query 111907 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAA 111966 |||||| || | | ||||||||| |||| ||| | ||||| ||||| ||||| Sbjct 7654 CTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAA 7713 Query 111967 GAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAG 112024 ||| || || | || || || | | | ||| |||||| | ||| || |||| | Sbjct 7714 GAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGG 7771 Query 112025 ACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 || ||||| | || || ||| |||| || || ||||| | ||||| Sbjct 7772 ACTCGCTCAATATTGTCTCCCCAGATACCGACAGCAACACGCATAATCATGT 7823 >seq48 Length=174106 Score = 95.1 bits (104), Expect = 2e-14 Identities = 297/449 (66%), Gaps = 22/449 (5%) Strand=Plus/Minus Query 11452 ATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGC 11511 ||||||||| || || || | ||| || | ||| |||||||| | || || ||| | || Sbjct 93746 ATCAAAACGGCCGGGACGCATGAGAGCCTTATCGAGGATATCGGCTCGGTTGGTGCCAGC 93687 Query 11512 AATAACCACAA--TGCCAGTCTC-ATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATT 11568 | || |||| ||| || | | ||| || || ||||| || || || | ||||| Sbjct 93686 CAGCACGACAACTTGC---TCACGAGTGTTGAATCCGTCCATTTCTGTCAGAATCTGATT 93630 Query 11569 AATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTG-----CT-T 11622 | ||| ||||| |||||| || | | || | | || ||| || | Sbjct 93629 CAATGTAGCTTCTCGCTCATCGTTGCCACCGAAGCCTCGTCCGCTTTCTTGACGAGCTCT 93570 Query 11623 GCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTC 11682 || | ||||| || || |||||||||| || || ||| ||| | ||| | | Sbjct 93569 ACCAATGGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGC 93510 Query 11683 AAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTG--CG 11740 || ||||| || |||| | | ||| |||||||||||||| || || || | | | Sbjct 93509 GAAAAGATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACC 93450 Query 11741 GCAGAGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800 || | | || || ||| || ||| |||||||| || ||||| ||| || || || Sbjct 93449 GCTTA-CGCT-GAAGAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTT 93392 Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTC 11858 || || |||||||| |||||||| | ||||| || || |||||||| || |||| Sbjct 93391 TTGCCAGTACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTC 93332 Query 11859 -CAAAATATCTCTCGGGTTGCTTGAGAAA 11886 |||| | |||| || || |||||||| Sbjct 93331 TCAAACT---TCTCAGGCTGTTTGAGAAA 93306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026598924800