Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq203 262 5e-65
>seq203
Length=54532
Score = 262 bits (290), Expect = 5e-65
Identities = 1116/1745 (64%), Gaps = 55/1745 (3%)
Strand=Plus/Plus
Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901
||||||||| ||||||||||| || |||||||| || | ||||| || | | |||
Sbjct 6112 GTAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAGTGCATGGAAGTGATCTT 6171
Query 117902 GGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 117961
| | ||| ||| | |||| | ||| | |||||| || || ||||| ||
Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231
Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAG 118019
|| || || ||||| | | || | || | || ||||||| ||||| |||||
Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 6289
Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079
|| || ||||| | ||||||| ||| || || || || ||| || | |
Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGA---ACCGTTCTCGGCA 6346
Query 118080 ATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136
|||| ||| |||||| | | ||||| || || || | |||||| | | ||
Sbjct 6347 ATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGC 6406
Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196
||||||||| || ||||| || ||| || | | | || || |||| ||||
Sbjct 6407 CAGGGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTG 6466
Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256
|| ||||| ||||||||||||||||||| || || | || || || || ||||||||
Sbjct 6467 TAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 6526
Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316
|| | || | ||| || | || | ||| | || | |||||||| |||||
Sbjct 6527 GCGAGCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCAC 6586
Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376
|| || | | || | | | |||||| || ||||| ||||| || | || ||
Sbjct 6587 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCG 6646
Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAGCTCGCCTC 118435
|| || |||| || || | || || |||| ||| ||||||||| ||| ||
Sbjct 6647 GGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAG-AGGCAGT 6705
Query 118436 GAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGA 118495
|||||| || ||||| || || ||||| || | || | | ||| || ||
Sbjct 6706 GAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGA 6765
Query 118496 ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 118555
|| || | | || | || || | || |||||||| ||||| || | |||||
Sbjct 6766 CTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAAT 6825
Query 118556 TGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGAT 118615
|| || |||| ||| || || || || || ||||| || || ||| ||
Sbjct 6826 AGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAAT 6885
Query 118616 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 118675
| || || || || || |||| |||| || |||||||| | | | || |
Sbjct 6886 GATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA 6945
Query 118676 ACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 118732
||| ||| | | | ||| | || || || | || |||| || || ||
Sbjct 6946 ---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATAC 7002
Query 118733 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAAT 118792
|| | |||||| ||| |||||| |||||||||||||| | ||| || || ||
Sbjct 7003 AGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGAT 7062
Query 118793 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGG 118852
|| ||||||||||| ||||| |||| ||||||| ||||||||||| |||||| | ||
Sbjct 7063 TGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGG 7122
Query 118853 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCAC-A 118910
| |||||||| || |||| | || || | | ||||| | || | ||||| |
Sbjct 7123 ATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-----GGCACGA 7177
Query 118911 GTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCT 118964
||| | || || |||| | || ||| ||||| ||||| || ||||||||
Sbjct 7178 ATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCC 7234
Query 118965 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACC 119023
|| || | || | || || || || || | ||||| | |||| ||| | |||
Sbjct 7235 TCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACC 7293
Query 119024 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 119083
|| || || ||||||||||| || || || ||||| || || ||| | ||| ||
Sbjct 7294 GTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACG 7353
Query 119084 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143
| || ||||||| | || || || ||||| || | || || | | ||| ||
Sbjct 7354 AGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGC 7413
Query 119144 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTT 119197
|||||| || |||| ||| | || | || || | | || ||| ||||||
Sbjct 7414 GTGCCAAGGCTCCAAGTAAATGGCAAATGCACC---AGGTCGCTTGTTGCCACCCTGGTC 7470
Query 119198 TACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCC 119257
||||| || |||||| ||| || ||||||||||| ||||||| ||||| ||| |||
Sbjct 7471 AACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCC 7530
Query 119258 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACC 119317
|| || || ||| ||| | |||| | | | ||||| | || || |||||
Sbjct 7531 GTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACC 7590
Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377
|| ||| ||| ||||| ||||| | |||| || | ||||| || |||||
Sbjct 7591 ACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCT 7650
Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTT 119437
||| |||| | | | ||||||||| ||||| ||| ||||| ||||||||
Sbjct 7651 GTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTT 7710
Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCC 119495
|||||| || || | || || || | | | ||| |||||| | |||||| |||
Sbjct 7711 GAAGAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCC 7768
Query 119496 AAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 119552
| ||| | | ||||| ||| | ||||||| | || ||||||| ||||| |
Sbjct 7769 AGGACTCGCTCAATATTGTCTCCCCAG---ATACCGACAGCAACACGCATAATCATGTGT 7825
Query 119553 TGGGG 119557
|||||
Sbjct 7826 TGGGG 7830
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618429881457280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |