Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq203 262 5e-65 >seq203 Length=54532 Score = 262 bits (290), Expect = 5e-65 Identities = 1116/1745 (64%), Gaps = 55/1745 (3%) Strand=Plus/Plus Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901 ||||||||| ||||||||||| || |||||||| || | ||||| || | | ||| Sbjct 6112 GTAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTAAAGTGCATGGAAGTGATCTT 6171 Query 117902 GGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 117961 | | ||| ||| | |||| | ||| | |||||| || || ||||| || Sbjct 6172 GCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACC 6231 Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAG 118019 || || || ||||| | | || | || | || ||||||| ||||| ||||| Sbjct 6232 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 6289 Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079 || || ||||| | ||||||| ||| || || || || ||| || | | Sbjct 6290 AGAGCTTTGATATCGGCCGGGATATTGGGGATGTTCTGAATAGA---ACCGTTCTCGGCA 6346 Query 118080 ATGA---GATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136 |||| ||| |||||| | | ||||| || || || | |||||| | | || Sbjct 6347 ATGATACGATTCTTCATCGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGC 6406 Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196 ||||||||| || ||||| || ||| || | | | || || |||| |||| Sbjct 6407 CAGGGATTGACAACCTGGAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTG 6466 Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 || ||||| ||||||||||||||||||| || || | || || || || |||||||| Sbjct 6467 TAAGGCTCGAAGCACTCATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 6526 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 || | || | ||| || | || | ||| | || | |||||||| ||||| Sbjct 6527 GCGAGCAGCAATGAGTTGCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCAC 6586 Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376 || || | | || | | | |||||| || ||||| ||||| || | || || Sbjct 6587 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCG 6646 Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG-GAGCTCGCCTC 118435 || || |||| || || | || || |||| ||| ||||||||| ||| || Sbjct 6647 GGAGAGCCCTTGAAAGTGGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAG-AGGCAGT 6705 Query 118436 GAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGA 118495 |||||| || ||||| || || ||||| || | || | | ||| || || Sbjct 6706 GAGGGCAGCATGATAAATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGA 6765 Query 118496 ATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 118555 || || | | || | || || | || |||||||| ||||| || | ||||| Sbjct 6766 CTCGAATGGCATGCGCAAGGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAAT 6825 Query 118556 TGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGAT 118615 || || |||| ||| || || || || || ||||| || || ||| || Sbjct 6826 AGGTCGGTGTCGCATGTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAAT 6885 Query 118616 AACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA 118675 | || || || || || |||| |||| || |||||||| | | | || | Sbjct 6886 GATTCTGTTCAGGTTACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA 6945 Query 118676 ACTGCGAGTCTCTTCATTG---ACATACTTAGGAAGGGCGATTGACGCCAGATTACACAC 118732 ||| ||| | | | ||| | || || || | || |||| || || || Sbjct 6946 ---GCGTCCCTCGTTGTAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATAC 7002 Query 118733 AGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAAT 118792 || | |||||| ||| |||||| |||||||||||||| | ||| || || || Sbjct 7003 AGCGACCTCATCAGGGGCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGAT 7062 Query 118793 GGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGG 118852 || ||||||||||| ||||| |||| ||||||| ||||||||||| |||||| | || Sbjct 7063 TGTTCCCAAGTTCTTCTGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGG 7122 Query 118853 CGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCAC-A 118910 | |||||||| || |||| | || || | | ||||| | || | ||||| | Sbjct 7123 ATTACCCGTCTCGGTCTGGGCTTCCAGGATGGAGTACCAGAGCTTCTG-----GGCACGA 7177 Query 118911 GTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGGGCTTCAAACTCT 118964 ||| | || || |||| | || ||| ||||| ||||| || |||||||| Sbjct 7178 ATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCC 7234 Query 118965 TCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACC 119023 || || | || | || || || || || | ||||| | |||| ||| | ||| Sbjct 7235 TCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATCACC 7293 Query 119024 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 119083 || || || ||||||||||| || || || ||||| || || ||| | ||| || Sbjct 7294 GTTCTTTTCGACACGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACG 7353 Query 119084 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143 | || ||||||| | || || || ||||| || | || || | | ||| || Sbjct 7354 AGCTCGGACTTCTTCCTTACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGC 7413 Query 119144 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTT 119197 |||||| || |||| ||| | || | || || | | || ||| |||||| Sbjct 7414 GTGCCAAGGCTCCAAGTAAATGGCAAATGCACC---AGGTCGCTTGTTGCCACCCTGGTC 7470 Query 119198 TACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCC 119257 ||||| || |||||| ||| || ||||||||||| ||||||| ||||| ||| ||| Sbjct 7471 AACATATCTGGCAGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGTGCC 7530 Query 119258 ATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACC 119317 || || || ||| ||| | |||| | | | ||||| | || || ||||| Sbjct 7531 GTTGGTGCCTGCAATGTAAGAGCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACC 7590 Query 119318 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGA 119377 || ||| ||| ||||| ||||| | |||| || | ||||| || ||||| Sbjct 7591 ACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCT 7650 Query 119378 GTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTT 119437 ||| |||| | | | ||||||||| ||||| ||| ||||| |||||||| Sbjct 7651 GTCCTCCTTCATGTCAACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTT 7710 Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCC 119495 |||||| || || | || || || | | | ||| |||||| | |||||| ||| Sbjct 7711 GAAGAGTGTGGGCGAGGCATG--TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCC 7768 Query 119496 AAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTAT 119552 | ||| | | ||||| ||| | ||||||| | || ||||||| ||||| | Sbjct 7769 AGGACTCGCTCAATATTGTCTCCCCAG---ATACCGACAGCAACACGCATAATCATGTGT 7825 Query 119553 TGGGG 119557 ||||| Sbjct 7826 TGGGG 7830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618429881457280