Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq203 228 9e-55
seq48 111 2e-19
seq60 91.5 2e-13
>seq203
Length=54532
Score = 228 bits (252), Expect = 9e-55
Identities = 899/1387 (65%), Gaps = 33/1387 (2%)
Strand=Plus/Minus
Query 104229 ACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACA---TTGATTCTGTCTTGG 104285
||||| | ||||| || || ||||||| |||||| |||| |||| ||| |||
Sbjct 7823 ACATGATTATGCGTGTTGCTGTCGGTATC--TGGGGA-GACAATATTGAGCGAGTCCTGG 7767
Query 104286 AGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAA 104343
| || ||| | |||||| ||| | | | || || || | || || ||||||||
Sbjct 7766 AAACCTACCATCTCATGTCCAGCAAACTCTTTACA--CATGCCTCGCCCACACTCTTCAA 7709
Query 104344 TGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTC 104403
||||| ||||| | || |||| ||||||||| | | || |||||||||
Sbjct 7708 CGCTGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAG 7649
Query 104404 AATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGG 104463
||| | || ||||||| || || | | || || ||||| ||| |||||| ||
Sbjct 7648 CATCGAAGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGG 7589
Query 104464 TATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGG 104523
||| || || | |||| | | | |||| | ||| ||| || || || ||
Sbjct 7588 TATCGGCTTGAATGTCCACCGTATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGG 7529
Query 104524 TCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAA 104583
|| ||||| | ||||| |||||||| || || ||| ||| || | ||||| |
Sbjct 7528 CACGTCCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGA 7469
Query 104584 TCAAGCTGGGCGTCGAAAGGGATCTATCGCAGT--CTAT---CTTG-AGCCATGGCACGC 104637
|| | ||| | | ||| || || ||| | | || |||| |||| ||||||||
Sbjct 7468 CCAGGGTGG-CAAC--AAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGC 7412
Query 104638 GGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCG 104697
||| | | ||||||||||| ||||| ||||| ||| | || || | || ||
Sbjct 7411 CGATGTGTTTGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCG 7352
Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757
||| | ||| ||||| |||||||| ||||| ||||||||| | || || ||| ||
Sbjct 7351 TGATTTATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGG 7292
Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
||||| |||| | || || || || || || || || | || | || ||||
Sbjct 7291 TGATTGGACTCTGATGTGCCCCAACGAATGCCCC-GGCCTGGCTGACTGCTACGGCGAGG 7233
Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876
||||||| || || || ||||| ||| || || || |||||| | | |
Sbjct 7232 AGTTTGAGGCTCTCTATGAGAAGTATGAGCGTGAGGGCAAGGGTCGTGCGACCATTCGTG 7173
Query 104877 CTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATG 104935
| | || | | ||| | | || || | | || |||||||| |||| || | ||||
Sbjct 7172 CC-CAGAAGCTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATG 7114
Query 104936 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 104995
|| ||||| || ||||||||| |||||| ||||| ||||| ||||| ||| ||
Sbjct 7113 CTCTACAAGGATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGC 7054
Query 104996 TCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAAC 105055
||||| ||||| || ||||| | || | | | | |||||| ||||| || |||
Sbjct 7053 TCCAACCTCTGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAAC 6994
Query 105056 CTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTT-GATTATGA 105114
| || || | ||||| ||| | ||| || | | | | ||| | || | |
Sbjct 6993 TTGGCCTCTCTGGCTCTGCCCGCCTTTGTTGA-CTACAACGAGGGACGCTACGACTTCCA 6935
Query 105115 AAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAA 105174
|| || ||||| || ||| | || ||||| |||||| | |||||| ||
Sbjct 6934 GAAGCTTCACGAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAA 6875
Query 105175 TTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGG 105234
|||||||| || || || || || ||| ||||||| || |||||| | ||
Sbjct 6874 CCACTACCCCGTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGG 6815
Query 105235 TGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCGACGAAG 105293
|| ||||||||||| || | ||| || | ||| ||| |||| || || ||||
Sbjct 6814 CGTCCAGGGTCTCGCTGACGCTTTCCTTGCCTTG-CGCATGCCATTCGAGTCACCTGAAG 6756
Query 105294 CGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTT 105353
| || |||| || |||||||||||||| ||||| || || || || |
Sbjct 6755 CCCGTGAGCTCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTC 6696
Query 105354 CAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAG 105413
|| ||||| ||| | || || || | || || |||| ||||| || || | |
Sbjct 6695 TCGAATTGGCCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGG 6636
Query 105414 GGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACTACGACTGGGA-AG 105470
| | ||||| || || ||||||| | |||| | | || | || || ||||| ||
Sbjct 6635 GCATCCTTCAGTTCGACATGTGGG-ACGTGA-AGCCTTCTGACCTCTGGGAGTGGGATAG 6578
Query 105471 CTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGC 105530
| |||||||| | ||||||||| | || |||| ||| | || | || || ||||
Sbjct 6577 C-CTCAAGGAGCAGATCAAGGAGCATGGGATTCGCAACTCATTGCTGCTCGCCCCCATGC 6519
Query 105531 CAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGA 105590
| || || || ||| | || || ||||||| ||||| ||||| || || |||||| | |
Sbjct 6518 CTACGGCTTCTACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCA 6459
Query 105591 ACATCTA 105597
|||| ||
Sbjct 6458 ACATTTA 6452
>seq48
Length=174106
Score = 111 bits (122), Expect = 2e-19
Identities = 185/262 (71%), Gaps = 8/262 (3%)
Strand=Plus/Minus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
|||||| || || |||||||||| |||||| ||| ||| | |||| | | | || ||
Sbjct 93563 GGCATCTATTTCGTCAATGAAGATGATGCAGGGTGCATTCTTGCGACCCTCGGCGAAAAG 93504
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821
||| || || || | || |||||||||||||| || || || | | || ||
Sbjct 93503 ATCTCGGACCCGTGAAGGACCAACACCAACAAACATTTCTACGAATTCGGAACCGCTTAC 93444
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
|| | ||| || ||| ||||||||| || ||||| ||| ||||| || || || |
Sbjct 93443 GCTGAA-GAACGGAACACCAGATTCACCTGCCGTGGCTTTGGCAAGAAGCGTTTTGCCAG 93385
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9938
||||||| |||||||||| || || || ||||||||||| || |||| |||| |
Sbjct 93384 TACCTGGAGGTCCCGCGAGGATAGCGCCGCGAGGAATCTTGGCCCCTAGCTTCTCAAACT 93325
Query 9939 ATCTCTCAGGTTGCTTAAGAAA 9960
||||||| || || |||||
Sbjct 93324 ---TCTCAGGCTGTTTGAGAAA 93306
>seq60
Length=156840
Score = 91.5 bits (100), Expect = 2e-13
Identities = 161/229 (70%), Gaps = 8/229 (3%)
Strand=Plus/Minus
Query 94731 AACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAG- 94788
|| |||||| || |||| ||||| || || |||||||| ||| || | ||||||
Sbjct 140220 AATAGTTCCTTGCATTCGCAAGAAGGCAGAATGGGCTATCCGCTGGATTCAGGACAAAGA 140161
Query 94789 -TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 94847
|| | ||| || |||| | | || ||||| ||| || ||||| ||||||
Sbjct 140160 ATCCAG---CTTCGCCCAGCGCTTGGTTGCTTTTGCTGCTGTGGAAGGTATTTTCTTCAG 140104
Query 94848 TGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCT 94906
||| | || ||| |||| | ||||| |||||||| || | ||||| |||||| ||
Sbjct 140103 CGGTGCTTT-TGCTTCTATCTTCTGGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCT 140045
Query 94907 TCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||||||| | ||||| ||||| ||||| | ||| ||| |||||
Sbjct 140044 TCTCCAACGAATTAATCTCGCGTGATGAGGGCTTGCACACAGACTTTGC 139996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583255783957120
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