Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq203 363 2e-95 >seq203 Length=54532 Score = 363 bits (402), Expect = 2e-95 Identities = 949/1432 (66%), Gaps = 48/1432 (3%) Strand=Plus/Plus Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566 ||| || || |||||| |||||| |||| ||||||| |||||| |||||||| ||| Sbjct 6424 GAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCACTC 6483 Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626 ||||| |||| ||||| | ||| || || || |||||||| |||| ||| | || || Sbjct 6484 ATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGAGCAGCAATGAGTT 6543 Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGC 78680 |||| |||||| |||||||| |||| |||| ||||| | ||| | Sbjct 6544 GCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCAGAAGG 6603 Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740 | | |||||||||| |||||||| ||||| || || || || |||||||| || Sbjct 6604 CTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCGGGAGAGCCCTTGAAAGT 6663 Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800 |||| | |||| |||||||| | |||| || | ||||| || || || | Sbjct 6664 GGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCAGTGAGGGCAGCATGATAAAT 6723 Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT-GGTCTCGTCGAACGAAAGGCCGA 78859 | ||| || || |||||||||||| || || | ||| | ||||| | | || | Sbjct 6724 GGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGAC-TCGAATGGCATGCGCA 6782 Query 78860 --GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCAT 78917 ||| | ||| | || || || ||||||||||| | | | || |||||||| ||||| Sbjct 6783 AGGCA--AGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAATAGGTCGGTGTCGCAT 6840 Query 78918 GTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTT 78977 |||||| ||||||||| ||| | ||||| ||| ||| |||| | ||||||||| Sbjct 6841 GTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAATGATTCTGTTCAGGTT 6900 Query 78978 ACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCT--TTG 79035 ||| |||||| | || ||||||| | || ||| || | | | ||| ||| Sbjct 6901 ACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA--GCGTCCCTCGTTG 6958 Query 79036 -----ATGAAAGTC-GGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGG 79089 | |||| | || || ||| || |||| |||||| || || ||| || ||| Sbjct 6959 TAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGCGACCTCATCAGGG 7018 Query 79090 CTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTC 79149 ||| |||||| ||||| ||||| | || || ||| || || | ||||||| Sbjct 7019 GCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGTTCCCAAGTTCTTC 7078 Query 79150 TGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACC 79209 || |||||||| ||||||||| ||||||||| |||| | || | || ||||| | Sbjct 7079 TGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATTACCCGTCTCGGTC 7138 Query 79210 TGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCC 79269 || | || | | || ||||| | | |||| || | | | | | |||||| Sbjct 7139 TGGGCTTCCAGGATGGAGTACCAGAGCTTCTGGGCACGAA-----TGGTCGCA-CGACCC 7192 Query 79270 TGTGC---GACG----TACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGG 79322 | ||| ||| ||| || || | | | || |||| || ||| || | Sbjct 7193 T-TGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGC 7251 Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTC 79382 |||||| ||||| |||| ||||||||||| ||| || ||| ||| || || || Sbjct 7252 CAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCTT 7311 Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 |||||| || || || ||||| || || ||| | || || || | || || | Sbjct 7312 CATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCTT 7371 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 || |||||| |||| || || || || | | ||||||||||| ||||||| || Sbjct 7372 ACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGTA 7431 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 ||||| || | ||| |||||| ||| ||||||| || || | ||| |||||||| Sbjct 7432 AATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTT 7491 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622 |||||| || |||||||| | || || | || |||||| || || || | Sbjct 7492 GAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAGA 7551 Query 79623 ACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680 || | || ||||| | | || || | | ||||| || || | | ||||||||| Sbjct 7552 GCCAGTGGCGCGAATACGGTGGA-CA-TTCAAGCCGATACCACCAGCCATCTTGGAGATC 7609 Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740 ||||| ||||||||| || |||||||| ||||| ||| |||||||| | || Sbjct 7610 ATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACG 7669 Query 79741 AGGAAGCAGCTCGACATCTG----TGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGT 79796 |||||||| ||||| ||| || | | || || ||||||||||| || |||| Sbjct 7670 AGGAAGCAAGACGACAGCTGACATTGAGGT----GTGCCAGCGTTGAAGAGTGTGGGCGA 7725 Query 79797 CGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTC 79856 || || || |||| || | ||| |||| ||| || ||| ||| ||| | | Sbjct 7726 GGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATT 7785 Query 79857 GTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCG 79908 ||| || ||| ||||| || || ||||| | | || |||||| |||| Sbjct 7786 GTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCG 7837 Score = 351 bits (388), Expect = 1e-91 Identities = 928/1404 (66%), Gaps = 36/1404 (3%) Strand=Plus/Minus Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177 ||||| || || ||||| ||| || ||| | | |||||||| || || ||| | Sbjct 7815 ATGCGTGTTGCTGTCGGTATCTGGGGAGACAATATTGAGCGAGTCCTGGAAACCTACCAT 7756 Query 19178 CTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAA 19236 || ||| |||| || |||| || || || |||| || || |||||||| || || Sbjct 7755 CTCATGT-CCAGCAAACTCTTTACACATGCCTCGCCCACACTCTTCAACGCTGGCACACC 7697 Query 19237 CAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296 | ||| ||||| || ||||| || | |||||||| |||||||| || ||||| Sbjct 7696 TCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAGCATCGAAGGCAT 7637 Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG---GA- 19352 ||| || ||||||||| ||||| ||||||||| | | || |||||||| || Sbjct 7636 CTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGGTATCGGCTTGAA 7577 Query 19353 --TCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410 ||||| | ||| || | | ||| | || || || ||||| | Sbjct 7576 TGTCCACCG------TATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGGCACGTC 7523 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470 | | ||| || | || ||||| || || ||||||||||| ||||| || || ||||||| Sbjct 7522 CAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGACCAGGG 7463 Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530 ||| ||| || || | || ||||| ||| | ||||| |||||||| || || | Sbjct 7462 TGGCAACAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTGTT 7403 Query 19531 GGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTT 19590 || ||||| || |||| |||||| ||| | || || | || ||| || | || Sbjct 7402 TGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCGTGATTTATT 7343 Query 19591 CACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCA 19650 | || | |||||||| || || |||||| || || || ||| ||| || ||| Sbjct 7342 CCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGGTGATTGGAC 7283 Query 19651 CCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGA 19710 ||||||||||| |||||||||| ||||| | ||| ||||||||||| ||| | | Sbjct 7282 TCTGATGTGCCCCAACGAATGCCCCGGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGC 7223 Query 19711 GTTGTACCGGACTTACGTAGCCC-AGGGCC-GGTTCAAGAAGGTGGTCCGGGCCCGGGAC 19768 | || || || | ||| ||||| || || | | | || |||| | | Sbjct 7222 TCTCTATGAGAAGTATG-AGCGTGAGGGCAAGGGTCGTGC-GACCATTCGTGCCCAGAAG 7165 Query 19769 GTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAG 19828 ||||| || | |||| || |||| |||||| || | || | |||| ||||||| Sbjct 7164 CTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATGCTCTACAAG 7105 Query 19829 GACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTG 19888 || ||| ||| ||| |||||||||||| | || | ||| |||||||| Sbjct 7104 GATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGCTCCAACCTC 7045 Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948 || || ||||| || ||| || || || ||| || || || || |||| || Sbjct 7044 TGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAACTTGGCCTCT 6985 Query 19949 CTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 ||| ||||| | || || ||| | || |||||| || | || Sbjct 6984 CTGGCTCTGCCCGCCTTTGTTGACTACAACGAGGGACGCTACGACTTCCAGAAGCTTCAC 6925 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062 ||||| || | |||||| ||||| ||||| | |||| ||| ||| ||||| Sbjct 6924 GAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAACCACTACCCC 6865 Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122 | ||| ||| || || || ||||| ||||| || || | | ||||||||||| Sbjct 6864 GTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGGCGTCCAGGGT 6805 Query 20123 CTGGCCGACGTTTTCATGATGC--TCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180 || || |||| |||| | ||| | || | ||||||| || | || || |||| Sbjct 6804 CTCGCTGACGCTTTCCT--TGCCTTGCGCATGCCATTCGAGTCACCTGAAGCCCGTGAGC 6747 Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCG 20240 |||||||| || || ||| || | || || || |||||| | || |||| | | Sbjct 6746 TCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTCTCGAATTGG 6687 Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300 |||| || | || || |||| || |||||||| || ||||| || ||||| ||||| | Sbjct 6686 CCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGGCATCCTTC 6627 Query 20301 AGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTT 20353 || |||||||||| ||| | |||| || | | ||| | |||||||| Sbjct 6626 AGTTCGACATGTGGGACGTGAAGCCTTCTGACCTCTGGGAGTGGGATAG-CCTCAAGGAG 6568 Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413 |||||||| || ||| |||||||||| ||||| |||| |||||||| || || || Sbjct 6567 CAGATCAAGGAGCATGGGATTCGCAACTCATTGCTGCTCGCCCCCATGCCTACGGCTTCT 6508 Query 20414 ACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTG 20473 ||| | ||||| |||| ||||| ||| |||||||| |||||| ||||||| ||| | Sbjct 6507 ACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCAACATTTACCAG 6448 Query 20474 CGTCGTACACTGGCCGGTGAGTTC 20497 || ||| ||||| ||||| ||| Sbjct 6447 CGCCGTGTCCTGGCAGGTGAATTC 6424 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCC-GTACAGGTGCATACT 78248 || ||||| ||||||||||||||||||||||| |||||| || ||| | |||||| Sbjct 6104 GTGCGCAAGTAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTA-AAGTGCATGGA 6162 Query 78249 CGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | | |||| ||| | || | || |||| |||||||| || ||||||||||| || Sbjct 6163 AGTGATCTTGCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAAT 6222 Query 78309 GTACGCACCGCGGTCGGCCGCCAT 78332 | | ||||| ||||| || ||||| Sbjct 6223 GAAAGCACCACGGTCAGCAGCCAT 6246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520082686720