Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq203 363 2e-95
>seq203
Length=54532
Score = 363 bits (402), Expect = 2e-95
Identities = 949/1432 (66%), Gaps = 48/1432 (3%)
Strand=Plus/Plus
Query 78507 GAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTC 78566
||| || || |||||| |||||| |||| ||||||| |||||| |||||||| |||
Sbjct 6424 GAATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCACTC 6483
Query 78567 GTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATT 78626
||||| |||| ||||| | ||| || || || |||||||| |||| ||| | || ||
Sbjct 6484 ATTGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGAGCAGCAATGAGTT 6543
Query 78627 CCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCGTCCCAA------AATTCATTCGC 78680
|||| |||||| |||||||| |||| |||| ||||| | ||| |
Sbjct 6544 GCGAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCAGAAGG 6603
Query 78681 CGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGT 78740
| | |||||||||| |||||||| ||||| || || || || |||||||| ||
Sbjct 6604 CTTCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCGGGAGAGCCCTTGAAAGT 6663
Query 78741 CTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACAC 78800
|||| | |||| |||||||| | |||| || | ||||| || || || |
Sbjct 6664 GGCGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCAGTGAGGGCAGCATGATAAAT 6723
Query 78801 AGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT-GGTCTCGTCGAACGAAAGGCCGA 78859
| ||| || || |||||||||||| || || | ||| | ||||| | | || |
Sbjct 6724 GGTCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGAC-TCGAATGGCATGCGCA 6782
Query 78860 --GCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCAT 78917
||| | ||| | || || || ||||||||||| | | | || |||||||| |||||
Sbjct 6783 AGGCA--AGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAATAGGTCGGTGTCGCAT 6840
Query 78918 GTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTT 78977
|||||| ||||||||| ||| | ||||| ||| ||| |||| | |||||||||
Sbjct 6841 GTTGCTGTTTCGGGCCTCCTGGACGGGGTAGTGGTTGACATCAATGATTCTGTTCAGGTT 6900
Query 78978 ACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCT--TTG 79035
||| |||||| | || ||||||| | || ||| || | | | ||| |||
Sbjct 6901 ACGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTA--GCGTCCCTCGTTG 6958
Query 79036 -----ATGAAAGTC-GGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGG 79089
| |||| | || || ||| || |||| |||||| || || ||| || |||
Sbjct 6959 TAGTCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGCGACCTCATCAGGG 7018
Query 79090 CTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTC 79149
||| |||||| ||||| ||||| | || || ||| || || | |||||||
Sbjct 7019 GCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGTTCCCAAGTTCTTC 7078
Query 79150 TGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACC 79209
|| |||||||| ||||||||| ||||||||| |||| | || | || ||||| |
Sbjct 7079 TGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATTACCCGTCTCGGTC 7138
Query 79210 TGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCC 79269
|| | || | | || ||||| | | |||| || | | | | | ||||||
Sbjct 7139 TGGGCTTCCAGGATGGAGTACCAGAGCTTCTGGGCACGAA-----TGGTCGCA-CGACCC 7192
Query 79270 TGTGC---GACG----TACGTCCGGTACAACTCGTTGAAAGCCTCCCCATAGACATCGGG 79322
| ||| ||| ||| || || | | | || |||| || ||| || |
Sbjct 7193 T-TGCCCTCACGCTCATACTTCTCATAGAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGC 7251
Query 79323 CAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTC 79382
|||||| ||||| |||| ||||||||||| ||| || ||| ||| || || ||
Sbjct 7252 CAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCTT 7311
Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442
|||||| || || || ||||| || || ||| | || || || | || || |
Sbjct 7312 CATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCTT 7371
Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502
|| |||||| |||| || || || || | | ||||||||||| ||||||| ||
Sbjct 7372 ACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGTA 7431
Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562
||||| || | ||| |||||| ||| ||||||| || || | ||| ||||||||
Sbjct 7432 AATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTT 7491
Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGT 79622
|||||| || |||||||| | || || | || |||||| || || || |
Sbjct 7492 GAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAGA 7551
Query 79623 ACCGCTCGCCCGAAT--GTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680
|| | || ||||| | | || || | | ||||| || || | | |||||||||
Sbjct 7552 GCCAGTGGCGCGAATACGGTGGA-CA-TTCAAGCCGATACCACCAGCCATCTTGGAGATC 7609
Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740
||||| ||||||||| || |||||||| ||||| ||| |||||||| | ||
Sbjct 7610 ATGGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACG 7669
Query 79741 AGGAAGCAGCTCGACATCTG----TGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGT 79796
|||||||| ||||| ||| || | | || || ||||||||||| || ||||
Sbjct 7670 AGGAAGCAAGACGACAGCTGACATTGAGGT----GTGCCAGCGTTGAAGAGTGTGGGCGA 7725
Query 79797 CGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTC 79856
|| || || |||| || | ||| |||| ||| || ||| ||| ||| | |
Sbjct 7726 GGCATGTGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATT 7785
Query 79857 GTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGGGCGTCTCG 79908
||| || ||| ||||| || || ||||| | | || |||||| ||||
Sbjct 7786 GTCTCCCCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCG 7837
Score = 351 bits (388), Expect = 1e-91
Identities = 928/1404 (66%), Gaps = 36/1404 (3%)
Strand=Plus/Minus
Query 19118 ATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACGAC 19177
||||| || || ||||| ||| || ||| | | |||||||| || || ||| |
Sbjct 7815 ATGCGTGTTGCTGTCGGTATCTGGGGAGACAATATTGAGCGAGTCCTGGAAACCTACCAT 7756
Query 19178 CTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGAA 19236
|| ||| |||| || |||| || || || |||| || || |||||||| || ||
Sbjct 7755 CTCATGT-CCAGCAAACTCTTTACACATGCCTCGCCCACACTCTTCAACGCTGGCACACC 7697
Query 19237 CAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCAT 19296
| ||| ||||| || ||||| || | |||||||| |||||||| || |||||
Sbjct 7696 TCAATGTCAGCTGTCGTCTTGCTTCCTCGTTGACATGAAGGAGGACAGCATCGAAGGCAT 7637
Query 19297 CTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGG---GA- 19352
||| || ||||||||| ||||| ||||||||| | | || |||||||| ||
Sbjct 7636 CTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGATGGCTGGTGGTATCGGCTTGAA 7577
Query 19353 --TCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410
||||| | ||| || | | ||| | || || || ||||| |
Sbjct 7576 TGTCCACCG------TATTCGCGCCACTGGCTCTTACATTGCAGGCACCAACGGCACGTC 7523
Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGG 19470
| | ||| || | || ||||| || || ||||||||||| ||||| || || |||||||
Sbjct 7522 CAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACTGCCAGATATGTTGACCAGGG 7463
Query 19471 GGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCAT 19530
||| ||| || || | || ||||| ||| | ||||| |||||||| || || |
Sbjct 7462 TGGCAACAAGCGACCTGGTGCATTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTGTT 7403
Query 19531 GGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTT 19590
|| ||||| || |||| |||||| ||| | || || | || ||| || | ||
Sbjct 7402 TGAGTTCCTTGATTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGAGCTCGTGATTTATT 7343
Query 19591 CACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCA 19650
| || | |||||||| || || |||||| || || || ||| ||| || |||
Sbjct 7342 CCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGTGTCGAAAAGAACGGTGATTGGAC 7283
Query 19651 CCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGA 19710
||||||||||| |||||||||| ||||| | ||| ||||||||||| ||| | |
Sbjct 7282 TCTGATGTGCCCCAACGAATGCCCCGGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGC 7223
Query 19711 GTTGTACCGGACTTACGTAGCCC-AGGGCC-GGTTCAAGAAGGTGGTCCGGGCCCGGGAC 19768
| || || || | ||| ||||| || || | | | || |||| | |
Sbjct 7222 TCTCTATGAGAAGTATG-AGCGTGAGGGCAAGGGTCGTGC-GACCATTCGTGCCCAGAAG 7165
Query 19769 GTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAG 19828
||||| || | |||| || |||| |||||| || | || | |||| |||||||
Sbjct 7164 CTCTGGTACTCCATCCTGGAAGCCCAGACCGAGACGGGTAATCCTTTCATGCTCTACAAG 7105
Query 19829 GACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTG 19888
|| ||| ||| ||| |||||||||||| | || | ||| ||||||||
Sbjct 7104 GATGCCTGTAACAGAAAGAGCAATCAGAAGAACTTGGGAACAATCCGCAGCTCCAACCTC 7045
Query 19889 TGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCC 19948
|| || ||||| || ||| || || || ||| || || || || |||| ||
Sbjct 7044 TGCACGGAAATTATCGAGTACTCTGCCCCTGATGAGGTCGCTGTATGCAACTTGGCCTCT 6985
Query 19949 CTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002
||| ||||| | || || ||| | || |||||| || | ||
Sbjct 6984 CTGGCTCTGCCCGCCTTTGTTGACTACAACGAGGGACGCTACGACTTCCAGAAGCTTCAC 6925
Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCG 20062
||||| || | |||||| ||||| ||||| | |||| ||| ||| |||||
Sbjct 6924 GAGGTCACGCAGGTCGTTGTTCGTAACCTGAACAGAATCATTGATGTCAACCACTACCCC 6865
Query 20063 ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGC 20122
| ||| ||| || || || ||||| ||||| || || | | |||||||||||
Sbjct 6864 GTCCAGGAGGCCCGAAACAGCAACATGCGACACCGACCTATTGGTGTTGGCGTCCAGGGT 6805
Query 20123 CTGGCCGACGTTTTCATGATGC--TCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGC 20180
|| || |||| |||| | ||| | || | ||||||| || | || || ||||
Sbjct 6804 CTCGCTGACGCTTTCCT--TGCCTTGCGCATGCCATTCGAGTCACCTGAAGCCCGTGAGC 6747
Query 20181 TCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGAACTCG 20240
|||||||| || || ||| || | || || || |||||| | || |||| | |
Sbjct 6746 TCAACAAGCAGATATTTGAGACCATTTATCATGCTGCCCTCACTGCCTCTCTCGAATTGG 6687
Query 20241 CCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGGTATCCTCC 20300
|||| || | || || |||| || |||||||| || ||||| || ||||| ||||| |
Sbjct 6686 CCAAGGAACAGGGGCCCTACGCCACTTTCAAGGGCTCTCCCGCCTCGGAGGGCATCCTTC 6627
Query 20301 AGCCGGACATGTGGGGCGTCA------CTGA-GAATGAGTTTTGGAGCGCCCTCAAGGTT 20353
|| |||||||||| ||| | |||| || | | ||| | ||||||||
Sbjct 6626 AGTTCGACATGTGGGACGTGAAGCCTTCTGACCTCTGGGAGTGGGATAG-CCTCAAGGAG 6568
Query 20354 GAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCGACCGCCTCG 20413
|||||||| || ||| |||||||||| ||||| |||| |||||||| || || ||
Sbjct 6567 CAGATCAAGGAGCATGGGATTCGCAACTCATTGCTGCTCGCCCCCATGCCTACGGCTTCT 6508
Query 20414 ACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAACATCTACTTG 20473
||| | ||||| |||| ||||| ||| |||||||| |||||| ||||||| ||| |
Sbjct 6507 ACCTCTCAGATTCTGGGTAACAATGAGTGCTTCGAGCCTTACACGTCCAACATTTACCAG 6448
Query 20474 CGTCGTACACTGGCCGGTGAGTTC 20497
|| ||| ||||| ||||| |||
Sbjct 6447 CGCCGTGTCCTGGCAGGTGAATTC 6424
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCC-GTACAGGTGCATACT 78248
|| ||||| ||||||||||||||||||||||| |||||| || ||| | ||||||
Sbjct 6104 GTGCGCAAGTAGTACATGCCCGTCTTGAGACCTAGCTTCCAGCCAGTA-AAGTGCATGGA 6162
Query 78249 CGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308
| | |||| ||| | || | || |||| |||||||| || ||||||||||| ||
Sbjct 6163 AGTGATCTTGCCCATGGTGGGATCCTTCATGTGAATGTTGAGGGATTGGGACTGGTCAAT 6222
Query 78309 GTACGCACCGCGGTCGGCCGCCAT 78332
| | ||||| ||||| || |||||
Sbjct 6223 GAAAGCACCACGGTCAGCAGCCAT 6246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548520082686720
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