Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq95 147 2e-30 >seq95 Length=111136 Score = 147 bits (162), Expect = 2e-30 Identities = 214/300 (71%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||||| ||||| | | |||| || ||||| || |||||||| | ||| || | Sbjct 30473 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 30414 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACG 30178 |||||||||| || ||||||||||||||| | || |||||| |||| ||| |||| Sbjct 30413 TTCCAGGCGCTCATGATGATGCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTATCACG 30354 Query 30179 GCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237 || || ||||| || || ||| | || |||||||| ||| | ||| |||| || Sbjct 30353 TCG----GCGAGCTGGTCGACTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATTC 30298 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297 ||| || || || | ||||||||| |||||||| || |||||||| || | || | ||| Sbjct 30297 TGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTG 30238 Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 | || |||| |||| | ||| || | || |||||| | ||||| ||||| || || Sbjct 30237 CGTGAGGCCCAGGCTGTCGAGAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 30178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406306993087296