Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq95 147 2e-30
>seq95
Length=111136
Score = 147 bits (162), Expect = 2e-30
Identities = 214/300 (71%), Gaps = 8/300 (3%)
Strand=Plus/Minus
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
||||| ||||| | | |||| || ||||| || |||||||| | ||| || |
Sbjct 30473 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 30414
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACG 30178
|||||||||| || ||||||||||||||| | || |||||| |||| ||| ||||
Sbjct 30413 TTCCAGGCGCTCATGATGATGCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTATCACG 30354
Query 30179 GCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
|| || ||||| || || ||| | || |||||||| ||| | ||| |||| ||
Sbjct 30353 TCG----GCGAGCTGGTCGACTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATTC 30298
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
||| || || || | ||||||||| |||||||| || |||||||| || | || | |||
Sbjct 30297 TGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTG 30238
Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357
| || |||| |||| | ||| || | || |||||| | ||||| ||||| || ||
Sbjct 30237 CGTGAGGCCCAGGCTGTCGAGAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 30178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406306993087296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |