Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq303 134 1e-26
>seq303
Length=27345
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || || ||| | || || || || ||||| ||||
Sbjct 11493 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTGGAGTCGTCT 11552
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || ||| || |||||||| || |||||||| || ||||||||
Sbjct 11553 GACACTATAGACAATGTGAAAACGAAGATTCAAGATAAGGAAGGCATTCCTCCCGATCAG 11612
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || | || || | ||| || | || ||||||
Sbjct 11613 CAGCGTCTTATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGGACACTTGCAGACTACAAC 11672
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || |||||||| || || |||||||| ||||||||||| |||||
Sbjct 11673 ATCCAGAAGGAGTCAACTTTGCATTTGGTGTTGCGTTTGCGTGGTGG 11719
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || ||||| || ||||||||| | || |||||||| || || | ||
Sbjct 10975 CATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATC 11034
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| || ||||| ||||| || || || || ||||||||
Sbjct 11035 TGACACCATCGACAATGTCAAGACCAAGATTCAGGACAAGGAGGGGATCCCCCCCGATCA 11094
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||||| | || | || || || || | || ||| | ||| | | || |||||
Sbjct 11095 ACAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAA 11154
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | ||| | || | || | || ||||| ||
Sbjct 11155 CATTCAGAAGGAGTCTACTCTTCATCTTGTGCTCCGCCTCCGTGGTGGTAT 11205
Score = 93.3 bits (102), Expect = 4e-14
Identities = 142/201 (71%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059
|| || ||| ||||||| ||| | || || || || ||||| | || || | || ||
Sbjct 11277 GTCAAGACTTTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCTGATACCATCGAC 11336
Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119
| || ||| || |||||||| || |||||||| || ||||| || |||||| | ||
Sbjct 11337 AACGTGAAAACCAAGATTCAAGATAAGGAAGGCATCCCTCCCGACCAGCAGCGTCTGATT 11396
Query 27120 TACGCCGGCAAACAATTGGAAGA---CAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
| ||| || || || ||||||| | || || || ||||||||||||| || |||
Sbjct 11397 TTCGCTGGTAAGCAGCTGGAAGATGGCCGTACGCTCG---CCGATTACAACATCCAGAAG 11453
Query 27177 GAGTCGACCTTACATTTGGTT 27197
||||| || | ||| | |||
Sbjct 11454 GAGTCCACACTTCATCTTGTT 11474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434914659701760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |