Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq303 102 6e-17
seq245 93.3 3e-14
>seq303
Length=27345
Score = 102 bits (112), Expect = 6e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| |||||||| || || || || |||||||| || || || || |
Sbjct 10976 ATGCAAATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 11035
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || || || | || ||||| || || | || || |||||
Sbjct 11036 GACACCATCGACAATGTCAAGACCAAGA-TTCAGGACAAGGAGGGGATCCCCCCCGATCA 11094
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || ||||| || || || || || |||| ||||| | | || |||||
Sbjct 11095 ACAGCGTCTGATCTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAA 11154
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 11155 CATTCAGAAGGAGTCTAC 11172
>seq245
Length=42083
Score = 93.3 bits (102), Expect = 3e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 23597 ATTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCG 23656
|||| ||| || |||||||||||||| || ||||||||||| || |||||||| ||||
Sbjct 31639 ATTAGTTAGGCAAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTCG 31698
Query 23657 AAGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTG 23716
| || || || | ||||| | || | | || || || ||||| || ||
Sbjct 31699 AGGTGGAGTCTTCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCA 31758
Query 23717 TACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTT 23776
| || || || || ||||| | || ||||| ||||| || || || || | |||||
Sbjct 31759 TTCCCCCGGACCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCC 31818
Query 23777 TAGGCGATTACAACATACAAAAAGAG 23802
| | ||| |||||||| || || |||
Sbjct 31819 TGGCCGACTACAACATCCAGAAGGAG 31844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338006765789504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |