Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq60 109 5e-19
>seq60
Length=156840
Score = 109 bits (120), Expect = 5e-19
Identities = 195/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Plus
Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872
||||| | || ||||| |||| || || |||| || || || || || || |
Sbjct 140318 CTTGA-TGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGA 140376
Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932
|||| |||||||||||||| | ||| || | ||||| ||||| | || | || |
Sbjct 140377 TCTGGAATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCAA 140436
Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992
| ||||| ||||| || || ||||| || |||||||| |||| | || || || |
Sbjct 140437 CCAAGTTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATGA 140496
Query 4993 AGTACTGTTCGTCAGGCTT---AAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049
|||| | |||||| || | | || ||||||| | |||||||||| | | ||| |
Sbjct 140497 AGTATTTCTCGTCATCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCGA 140556
Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092
||||| | ||||| || || || || || |||||||||||
Sbjct 140557 TCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCCTTTTTGTACAT 140599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427046019189104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |