Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq95 140 2e-28
>seq95
Length=111136
Score = 140 bits (154), Expect = 2e-28
Identities = 213/301 (71%), Gaps = 8/301 (3%)
Strand=Plus/Minus
Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 27386
|||||| ||||| | | |||| || ||||| || |||||||| | ||| ||
Sbjct 30474 TACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGC 30415
Query 27387 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CAC 27443
||||||||||| || ||||||||||||||| | || |||||| |||| ||| |||
Sbjct 30414 GTTCCAGGCGCTCATGATGATGCGCCTGTCGTACGGCTTGTTCTTGATCTTGTCTATCAC 30355
Query 27444 GGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACT 27502
| || || ||||| || || ||| | || |||||||| || | ||| |||| |
Sbjct 30354 GTCG----GCGAGCTGGTCGACTCCCTTGCCGGAGTAGTCGGCCTTGGCGTCGATGTATT 30299
Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562
|||| || || || | ||| ||||| |||||||| || |||||||| || | || | ||
Sbjct 30298 CTGCGCCAAAGTGGCGCCACTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGT 30239
Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622
|| || |||| |||| | ||| || | || |||||| | ||||| ||||| || |
Sbjct 30238 GCGTGAGGCCCAGGCTGTCGAGAAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGC 30179
Query 27623 C 27623
|
Sbjct 30178 C 30178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369504101682128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |