Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq60 113 6e-20
>seq60
Length=156840
Score = 113 bits (124), Expect = 6e-20
Identities = 201/293 (69%), Gaps = 3/293 (1%)
Strand=Plus/Plus
Query 48402 TCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCC 48461
|| || | ||| || || ||||| ||| || |||| ||||| || || || ||
Sbjct 140316 TCCTTGATGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATG 140375
Query 48462 ATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCA 48521
||||| ||||||||||| || | || || | || || || || | || || |||
Sbjct 140376 ATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCA 140435
Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581
|||| ||||| || || || || || ||||||||||||||| | || || ||
Sbjct 140436 ACCAAGTTCTCGTTGACGATGCCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATG 140495
Query 48582 AAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCT 48638
|| ||||| |||| | ||| | || |||||||| | | ||||||||| | |||
Sbjct 140496 AAGTATTTCTCGTCATCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCG 140555
Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
| ||||| || ||||| || || ||||| || ||||| ||||| | ||| ||
Sbjct 140556 ATCTCTTCGGCCGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 140608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694662825848320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |