Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07- 15] 688 sequences; 35,593,152 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq203 181 2e-40 seq60 114 2e-20 >seq203 Length=54532 Score = 181 bits (200), Expect = 2e-40 Identities = 1180/1875 (63%), Gaps = 41/1875 (2%) Strand=Plus/Plus Query 75371 TCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTT 75430 |||| |||||||| || || | || || | || || || | |||||||| || || Sbjct 6068 TCCACGGTGAACTGGATAGGTGCGGCAGCAGCTTGCGTGCGCAAGTAGTACATGCCCGTC 6127 Query 75431 TTTAGACCCAGACTCCATCC-GTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATC 75489 || ||||| || |||| || ||| || |||||| || | ||| | ||||| Sbjct 6128 TTGAGACCTAGCTTCCAGCCAGTA-AAGTGCATGGAAGTGATCTTGCCCATGGTGGGATC 6186 Query 75490 GGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCAT 75549 || ||||| || | || || || || |||||||| || | ||||| ||||| Sbjct 6187 CTTCATGTGAATGTTGAGGGATTGGGACTGGTCAATGAAAGCACCACGGTCAGCAGCCAT 6246 Query 75550 TTTTATAATG-GTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCAT 75608 | | | | ||| || ||| ||||||||||| ||||||| | | ||||||||| Sbjct 6247 CTGCACGACGTGTCGTT-GAGAAATTTCCCAAACAGTTTTGTAGAGAGCTTTGATATCGG 6305 Query 75609 CTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCT 75665 | || | ||| | | || ||||| || ||| || | || || |||||| ||| Sbjct 6306 CCGGGATATTGGGGATGTTCTGAATAGAACCGTTCTCGGCAATGATACGATTCTTCATCG 6365 Query 75666 CATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAA 75725 ||||| ||| | | ||| | | || | || || ||||| |||| || | Sbjct 6366 CATCAGACCAAAGGCCCATGTCGACGAGATCTTTGAGTAGCCAGGGATTGACAACCTGGA 6425 Query 75726 ATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCAT 75785 |||| || | || || | || |||||| || || || || || | | |||| Sbjct 6426 ATTCACCTGCCAGGACACGGCGCTGGTAAATGTTGGACGTGTAAGGCTCGAAGCACTCAT 6485 Query 75786 TGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 75845 |||| |||| ||| |||| || ||||| || ||||| || || | || || || | Sbjct 6486 TGTTACCCAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGGGCGAGCAGCAATGAGTTGC 6545 Query 75846 TGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTA 75905 | ||||| |||| | || || || | ||| ||||| || || || || Sbjct 6546 GAATCCCATGCTCCTTGATCTGCTCCTTGAGGCTATCCCACTCCCAGAGGTCAGAAGGCT 6605 Query 75906 CAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTT 75965 || ||||| | ||| | || || || || | || || || || | || Sbjct 6606 TCACGTCCCACATGTCGAACTGAAGGATGCCCTCCGAGGCGGGAGAGCCCTTGAAAGTGG 6665 Query 75966 CGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTG 76025 |||| | ||| | | | || | |||| | || | ||| | | |||||| | Sbjct 6666 CGTAGGGCCCCTGTTCCTTGGCCAATTCGAGAGAGGCAGTGAGGGCAGCATGATAAATGG 6725 Query 76026 TTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAA 76085 | || || |||| ||| || || || | |||||| | || || || ||| || Sbjct 6726 TCTCAAATATCTGCTTGTTGAGCTCACGGGCTTCAGGTGACTCGAATGGC--ATGCGCAA 6783 Query 76086 G--AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATT 76143 | || || || || || || ||||| || |||| ||||||||||| |||| | | || Sbjct 6784 GGCAAGGAAAGCGTCAGCGAGACCCTGGACGCCAACACCAATAGGTCGGTGTCGCATGTT 6843 Query 76144 GGAAATTTCAG--CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 | |||| | || ||||| ||||| | || | ||| || ||| | || || || Sbjct 6844 GCTG-TTTCGGGCCTCCTGGACG-GGGTAGTGGTTGACATCAATGATTCTGTTCAGGTTA 6901 Query 76202 CTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATC----TA- 76256 | ||||| || | || || | || || | || || | ||| || || Sbjct 6902 CGAACAACGACCTGCGTGACCTCGTGAAGCTTCTGGAAGTCGTAGCGTCCCTCGTTGTAG 6961 Query 76257 TCA-CAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTG 76315 ||| |||| ||||| | ||| || | || || || || ||||||| || | Sbjct 6962 TCAACAAAGGCGGGCAGAGCCAGAGAGGCCAAGTTGCATACAGCGACCTCATCAGG---G 7018 Query 76316 GCA---TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 ||| || | || || |||||||| || || | ||| ||||| | || | Sbjct 7019 GCAGAGTACTCGATAATTTCCGTGCAGAGGTTGGAGCTGCGGATTGTTCCCAAGTTCTTC 7078 Query 76373 TGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATC 76432 || ||||||||| ||||||| | ||||| || || | || ||| | || || || || Sbjct 7079 TGATTGCTCTTTCTGTTACAGGCATCCTTGTAGAGCATGAAAGGATTACCCGTCTCGGTC 7138 Query 76433 TGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTAT--CGCT 76490 || | ||| | || || | ||||| | ||| | | || | | | | | || Sbjct 7139 TGGGCTTCCAGGATGGAGTACCAGA-GCTTCTGGGCACGA--ATGG--TCGCACGACCCT 7193 Query 76491 T---CTCTCTTTCATA-TTGTG-TATATAACCGTTCAAATTCATCTCCCCAAACATCATC 76545 | ||| | ||||| || | || | | || ||||| || || || | ||| | Sbjct 7194 TGCCCTCACGCTCATACTTCTCATAGAGAGCC--TCAAACTCCTCGCCGTAGCAGTCAGC 7251 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 || || || ||||| || || ||||||| | ||| ||||| | | | || || || Sbjct 7252 CAGGCCGGGGCATTCGTTGGGGCACATCAGAGTCCAATCACCGTTCTTTTCGACACGCTT 7311 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 ||| || ||||| || ||||| ||||||| |||| ||| || | || |||||| || Sbjct 7312 CATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATCACGAGCTCGGACTTCTTCCTT 7371 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || |||||| | ||| |||||||| | | ||| | ||||| || || | || Sbjct 7372 ACCGTGGTTCTTTCGCAAATCAAGGAACTCAAACACATCGGCGTGCCAAGGCTCCAAGTA 7431 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 || || | |||| ||||| || || || ||||| || | ||||||||||||||| || Sbjct 7432 AATGGCAAATGCACCAGGTCGCTTGTTGCCACCCTGGTCAACATATCTGGCAGTGTTGTT 7491 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 |||| | | ||| ||||| | || || || || || || || || | ||| ||| Sbjct 7492 GAAAACACGAAGCATGGGAATGACACCATTGGACGTGCCGTTGGTGCCTGCAATGTAAGA 7551 Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 ||| || |||||| | | | ||| || || || ||||| || ||||| | Sbjct 7552 GCCAGTGGCGCGAATACGGTGGACATTCAAGCCGATACCACCAGCCATCTTGGAGATCAT 7611 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 || ||| || | |||||||||||||| || || || || ||| |||||| || || Sbjct 7612 GGCGCAGGTCTTGAGCGTGTCATAGATGCCTTCGATGCTGTCCTCCTTCATGTCAACGAG 7671 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 || || |||| ||| ||| || || || || || | ||| || || ||||| Sbjct 7672 GAAGCAAGACGACAGCTGACATTGAGGTGTGCCAGCGTTGAAGAGTGTGGGCGAGGCATG 7731 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG 77085 || || ||| || | |||| ||| ||||| | ||| || |||| | Sbjct 7732 TGTAAAGAGTTTGCTGGACATGAGATGGTAGGTTTCCAGGACTCGCTCAATATTGTCTCC 7791 Query 77086 ATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATT 77145 || || ||||| |||||||| | ||| || || || || || ||| |||| || Sbjct 7792 CCAGATACCGACAGCAACACGCATAATCATGTGTTGGGGCCGCTCGACAATCTTGCCGTT 7851 Query 77146 TATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205 | ||| | | ||||| || ||||| || || ||||| || | ||| ||||| Sbjct 7852 GAGTTTGAGAAGATATGACCGCTCTAAAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 7911 Query 77206 TCTTTCGTAAATAAT 77220 ||| || || | ||| Sbjct 7912 TCTGTCATAGACAAT 7926 >seq60 Length=156840 Score = 114 bits (126), Expect = 2e-20 Identities = 328/502 (65%), Gaps = 7/502 (1%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || || || ||||| || || ||||| || ||||| || ||||| ||||||| || || Sbjct 139702 TTCTGATACTCACCAACTCGCTTCTCAAAGAAATTTGTCTTGCCGCCCAATGAGATGTTC 139761 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || ||||| ||||| | ||||| | || | || | | | | Sbjct 139762 TCCATGAAGTCAAAAGGATTGGCCGTCTTATACACCTTCTCGTTACCAAGAGCAACGAGC 139821 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| || || || || || ||| ||||||| | |||||| || | || Sbjct 139822 AGGCGATCGGCCACAAACTCAATGTACTGCTTCATCAATGTGGCATTCATGCCCAGTAGA 139881 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 || | |||||| || ||||||||||| || || ||||||||||| | || ||| Sbjct 139882 GCACATGGCAAAGCCTCAGTCAGAAACTCTTGCTCGATGGTGACAGCATCTGTAATAATC 139941 Query 46579 GATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 |||| | | | || || | | | ||| |||| || || || || |||| Sbjct 139942 --TGTTGGATCATCTGCTTGCTGGCTCGGTGCTTCAAGTGAGAGTGCAGCAAGCAGGCAA 139999 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 | || || | ||| ||||| | ||||||||||| || || ||||| || |||| Sbjct 140000 AGTCTGTGTGCAAGCCCTCATCACGCGAGATTAATTCGTTGGAGAAGGTGAGACCGGGCA 140059 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | | |||||||| || ||||| || |||| || |||| || ||||| || |||| Sbjct 140060 TCAAGCCACGCTTCTTCAGCCAGAAGATAGAAGCAAAAGCACCGCTGAAGAAAATACCTT 140119 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATT---ATGAATCCACC 46813 | ||||| || || || || | | || || | |||| || || |||||||| | Sbjct 140120 CCACAGCAGCAAAAGCAACCAAGCGCTGGGCGAAGCTGGATTCTTTGTCCTGAATCCAGC 140179 Query 46814 TTTGAGCCCAATCAGCCTTTTT 46835 |||||| || ||||| || Sbjct 140180 GGATAGCCCATTCTGCCTTCTT 140201 Score = 114 bits (126), Expect = 2e-20 Identities = 225/332 (68%), Gaps = 3/332 (1%) Strand=Plus/Plus Query 46852 GTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATT 46911 || || || ||||| ||||| |||| | | || || || | || || || ||| Sbjct 140277 GTCTCGATGGCATTGAAGAGGTAGTTGCGCTGAGCATGCTCCTTGATGTAGGTGTCGATT 140336 Query 46912 AAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACAT 46971 || ||| || |||| || || ||||| || || ||||| ||||||||||| || Sbjct 140337 AAGAGAGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAATCCGTAAAAGCAA 140396 Query 46972 CTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATT 47031 | || |||| | || || || | || || ||| ||| ||||| || || || Sbjct 140397 CGAGCCTCAGGGACTTGGACTTCACCGCTGAAGCGCTCAACCAAGTTCTCGTTGACGATG 140456 Query 47032 CCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTC 47091 || || ||||||||||||||||| || || || || ||||| || || | || Sbjct 140457 CCGTCGGAAGCAGCAAAAAATGCCAGTATGTGGGAGATGAAGTATTTCTCGTCATCATTC 140516 Query 47092 A---GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAAT 47148 | | || |||||||| | | ||||||||| | ||| | ||||| || |||||||| Sbjct 140517 AGACGATTGTTCCAGTCGTGCAAATCTTTTGACAGATCGATCTCTTCGGCCGTCCAGAAG 140576 Query 47149 GACGCCTCTGCTTTTTTATACATATTCCATAT 47180 || ||||| || ||||| ||||| | ||| || Sbjct 140577 GAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 140608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712928268764160