Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq303 118 2e-21
seq245 98.7 2e-15
>seq303
Length=27345
Score = 118 bits (130), Expect = 2e-21
Identities = 148/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| ||||||||||| || ||||| || ||||||||||||||||| | || | |||||
Sbjct 11477 GAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGCGAGCGTACGGCCATC 11418
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || || || ||||| || || | ||||||||| | | ||| |||||||| ||
Sbjct 11417 TTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTATC 11358
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|||||| || ||| || | || | | | || ||| ||| || || || || || ||
Sbjct 11357 TTGAATCTTGGTTTTCACGTTGTCGATGGTATCAGAAGACTCCACCTCGAGGGTGATGGT 11298
Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094
|| || || | |||||| ||||
Sbjct 11297 CTTTCCGGTCAAAGTCTTGACGA 11275
Score = 114 bits (126), Expect = 3e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--G 151958
||| | ||| ||||| || ||||||||||| || || | || | ||||| || || |
Sbjct 11696 ATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGTGTCCGGCCATCCTCGAGCTG 11637
Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018
|||| || ||||||||||| | |||||| || | | || |||||||| ||||||||
Sbjct 11636 CTTT--CCAGCGAAGATAAGACGCTGCTGATCGGGAGGAATGCCTTCCTTATCTTGAATC 11579
Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078
|| ||| ||| | |||| |||| || ||| || || || || || || || ||
Sbjct 11578 TTCGTTTTCACATTGTCTATAGTGTCAGACGACTCCACCTCGAGGGTGATGGTCTTTCCT 11519
Query 152079 GTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||||| ||||||
Sbjct 11518 GTGAGGGTCTTGACGAAGATCTGCAT 11493
Score = 109 bits (120), Expect = 1e-18
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||||||||||||||| || || |||||||| || || | || |
Sbjct 11194 GAGGCGGAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGCGAGGGTGCG 11135
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || || || ||||| || || ||||| || | ||| || || | | ||| ||
Sbjct 11134 GCCGTCCTCAAGCTGCTTT--CCAGCAAAGATCAGACGCTGTTGATCGGGGGGGATCCCC 11077
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || ||||| || |||||| | || | | |||| || ||| || ||||||
Sbjct 11076 TCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATGGTGTCAGATGACTCGACCTCAAGA 11017
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| || || || || ||||| | |||||
Sbjct 11016 GTGATGGTCTTGCCGGTAAGGGTTTTGACGAAAATTTGCAT 10976
>seq245
Length=42083
Score = 98.7 bits (108), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 1/214 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||| || ||||||||||| ||||| | || | ||||| || |
Sbjct 31859 CAAG-TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATCCTCGA 31801
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || | ||||||||||| | || || ||||| || || |
Sbjct 31800 GCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGA 31741
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || ||||| | || | | |||| ||| ||| || || || || || || || |
Sbjct 31740 TCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATCGTCTTCC 31681
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
||||||| ||||| ||||| | |||||| || ||
Sbjct 31680 CCGTGAGGGTCTTGACGAAAATCTGCATCTTGCC 31647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153810629069648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |