Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20hypoxylon_20[genbank_20GCA_5F000729835.1_202014-07-
15] 688 sequences; 35,593,152 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq245 196 1e-44
seq303 150 4e-31
seq1 138 2e-27
>seq245
Length=42083
Score = 196 bits (216), Expect = 1e-44
Identities = 182/231 (79%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || |||| || | ||||| || || |||||||||||||| ||
Sbjct 31880 ACCACCACGCAGGCGCAGCACCAAGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGC 31821
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||||||||| || || || || |||||||| | || || ||||| ||
Sbjct 31820 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCCGGGGG 31761
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 31760 AATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 31701
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
||||| ||||||||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 31700 CTCGAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 31650
>seq303
Length=27345
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || ||||| | || || || || ||||||||||| ||
Sbjct 11203 ACCACCACGGAGGCGGAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGC 11144
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| |||||||| ||||| || || || || |||||||||| ||| ||||| || ||
Sbjct 11143 GAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCAAAGATCAGACGCTGTTGATCGGGGGG 11084
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| || ||||| | || || | ||||| ||||| || | |||||
Sbjct 11083 GATCCCCTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATGGTGTCAGATGACTCGAC 11024
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| |||||||| ||||| || || | || || ||||| || |||||
Sbjct 11023 CTCAAGAGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAAATTTGCAT 10976
Score = 150 bits (166), Expect = 4e-31
Identities = 166/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| ||||| || || ||||| | ||| || || ||||||||||| || ||
Sbjct 11492 ACCGCCACGAAGGCGGAGAACAAGATGAAGTGTGGACTCCTTCTGGATGTTGTAATCGGC 11433
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| |||||||| || || || || || || || |||| ||| || ||||| ||
Sbjct 11432 GAGCGTACGGCCATCTTCCAGCTGCTTACCAGCGAAAATCAGACGCTGCTGGTCGGGAGG 11373
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| ||||| ||||| | ||| ||| | ||||| || || |||| || ||
Sbjct 11372 GATGCCTTCCTTATCTTGAATCTTGGTTTTCACGTTGTCGATGGTATCAGAAGACTCCAC 11313
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092
||||| ||||| ||||| || ||||||||||| |||| ||
Sbjct 11312 CTCGAGGGTGATGGTCTTTCCGGTCAAAGTCTTGACGACTA 11272
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||||| || | |||| ||| || || || || |||||||||||||| |||
Sbjct 11719 CCACCACGCAAACGCAACACCAAATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCTGCA 11660
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||||||||| || || || || || ||||| | ||| || || || |||
Sbjct 11659 AGTGTCCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGATCGGGAGGA 11600
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| || ||||| ||||| ||||| | ||| || | || |||||||| || | || ||
Sbjct 11599 ATGCCTTCCTTATCTTGAATCTTCGTTTTCACATTGTCTATAGTGTCAGACGACTCCACC 11540
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 11539 TCGAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 11493
>seq1
Length=703770
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| ||||| |||||||| || || || ||||||||||| || || || || |||||||||
Sbjct 263555 TTCTGGATATTGTAGTCTGCCAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATC 263496
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| || || |||||| || || |||||||| || || ||||| | ||| || | |||
Sbjct 263495 AATCGCTGCTGGTCAGGGGGGATGCCCTCCTTATCCTGAATCTTGGATTTGACATTGTCG 263436
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || | ||||| ||||||||||||| ||||| || ||
Sbjct 263435 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTACCCGTCAGGGTCTTCACAAA 263377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046729972993952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |