Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq96 105 7e-18
>seq96
Length=87723
Score = 105 bits (116), Expect = 7e-18
Identities = 196/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || ||||| | || ||| |||| ||||| || |||||||| |||||
Sbjct 52597 ATGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATATTCTCCATCATGATCTGG 52656
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|||||||||||||| || || || | | ||| ||||| || ||| || || | |
Sbjct 52657 AATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCGCCGCTGAAGCGCTCAACCAAG 52716
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| ||||| || |||||||| || || || || |||| || || |||||||||
Sbjct 52717 TTCTCGTTGACAATGCCGTCAGAGGCAGCAAAGAATGCCAGAATGTGGGAGATGAAATAT 52776
Query 17414 TT---TTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
|| ||||| | || | |||||| | |||||||| || | ||| | |||
Sbjct 52777 TTCTCATCGTCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTCGACAGATCGATCTCT 52836
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|||| ||||| ||| |||| | |||||||| ||||| | ||| ||
Sbjct 52837 TCGGCCGTCCAGAAAGAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 52883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517528585688400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |