Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 1e-11 >seq5 Length=693879 Score = 86.0 bits (94), Expect = 1e-11 Identities = 176/259 (68%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||||| || ||||| |||||||||| || || ||| || || ||||| || || Sbjct 203832 GCCGATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCC 203891 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGAC-TG 94903 ||| ||||| || || | | | | | |||||||| || || || || | ||| || Sbjct 203892 CTCGATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGACGACAGCTGACAT-TGAGGTG 203950 Query 94904 TTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCAT 94963 | ||| || || |||||||| || || || || || | || |||||||||| | Sbjct 203951 TGCCAGCGTTGAATAGTGTGGGTGAGGCGTGTGTGAAGAGTTTGCTGGACATGAGATGGT 204010 Query 94964 ATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023 | ||||| | ||| | || | ||| || |||||||| ||||||||||||| Sbjct 204011 AGGTTTCCAGGACTCGCTCAATATTGTCTCCCCAGATCCCGACAGCGACACGCATAATCA 204070 Query 95024 TGTCCTGAGGGCGCTCAAC 95042 ||| ||| || ||||| || Sbjct 204071 TGTGCTGGGGTCGCTCGAC 204089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989550654111650