Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq5 86.0 1e-11
>seq5
Length=693879
Score = 86.0 bits (94), Expect = 1e-11
Identities = 176/259 (68%), Gaps = 2/259 (1%)
Strand=Plus/Plus
Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844
||||| || ||||| |||||||||| || || ||| || || ||||| || ||
Sbjct 203832 GCCGATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCC 203891
Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGAC-TG 94903
||| ||||| || || | | | | | |||||||| || || || || | ||| ||
Sbjct 203892 CTCGATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGACGACAGCTGACAT-TGAGGTG 203950
Query 94904 TTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCAT 94963
| ||| || || |||||||| || || || || || | || |||||||||| |
Sbjct 203951 TGCCAGCGTTGAATAGTGTGGGTGAGGCGTGTGTGAAGAGTTTGCTGGACATGAGATGGT 204010
Query 94964 ATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023
| ||||| | ||| | || | ||| || |||||||| |||||||||||||
Sbjct 204011 AGGTTTCCAGGACTCGCTCAATATTGTCTCCCCAGATCCCGACAGCGACACGCATAATCA 204070
Query 95024 TGTCCTGAGGGCGCTCAAC 95042
||| ||| || ||||| ||
Sbjct 204071 TGTGCTGGGGTCGCTCGAC 204089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989550654111650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |