Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq96 102 6e-17 >seq96 Length=87723 Score = 102 bits (112), Expect = 6e-17 Identities = 133/179 (74%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 23005 CTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATACAGTTTGTTGCAGATCGCCT 23063 |||||||| |||||| | ||| | |||| || |||||| ||||||| || |||||||| Sbjct 52157 CTACTTGGCATGAAT-GCCACATTGATGAAACAGTACATTGAGTTTGTAGCCGATCGCCT 52099 Query 23064 GCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCATTTGATTTCATGGA 23123 ||| | ||| || ||| ||| ||| |||| || || ||||| ||||| |||||||| Sbjct 52098 GCTTGTTGCTCTTGGTAATGAGAAGGTGTACAAGACGGCTAATCCTTTTGACTTCATGGA 52039 Query 23124 TAACATTAGCATTGAA-GGTAAAACAAACTTCTTTGAACGCCGTGTGAGTGAATATCAG 23181 ||||| ||||| || || ||||||||||| || || ||| |||| || ||| Sbjct 52038 GAACATCT-CATTGGGTGGCAAGACAAACTTCTTCGAGAAACGAGTGGGTGAGTACCAG 51981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356222181599890