Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq20 96.9 4e-15 >seq20 Length=366416 Score = 96.9 bits (106), Expect = 4e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014 ||||| || || |||||||| || || || | || || || || || |||||||| || Sbjct 156146 TGGCCACCACGCAAACGCAACACCAAGTGCAAGGTTGACTCCTTCTGAATGTTGTAGTCT 156205 Query 143015 CTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGG 143073 | ||| | || | || || || ||||| || || |||| ||||| ||||| ||||| Sbjct 156206 GCAAGTGTCCGTCCA-TCCTCAAGCTGTTTCCCGGCGAAGATAAGACGCTGCTGGTCGGG 156264 Query 143074 AGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTC 143133 ||| |||||||||||||| ||| ||| || | | || | ||||| | | ||| Sbjct 156265 AGGAATGCCTTCTTTGTCTTGAATCTTTGACTTCACGTTGTCTATTGTGTCAGAAGATTC 156324 Query 143134 TACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 || |||| || | ||||| || || | || || ||||| || |||||| Sbjct 156325 CACCTCAAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCATA 156376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506997731901600