Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 3e-13 >seq18 Length=380631 Score = 91.5 bits (100), Expect = 3e-13 Identities = 128/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 334181 GGGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240 |||||| ||||||| || | || ||||| ||||| ||||| || || || | || Sbjct 84510 GGGGAAGCCTTCAACTTGCTCATTATTGATAGCACGCATGAGAGTAGACTTTCCGGATCC 84569 Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAG 334300 ||| || || ||||||||||| || | |||||||| ||| | | || | ||| || Sbjct 84570 GTTGGGACCGCACAGACCGTAACGCTGACCACGCTTAAGACGCAGGTGAGTTTGGTTGAG 84629 Query 334301 AAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACCGACTTC 334360 |||||| || |||| || |||||||| || ||| | || |||||||| || |||| Sbjct 84630 AAGAATCTTAGCACCGTAGGCCAGAGAGAAGGTACAGTTGCAAAGATCCTCGCCCTCTTC 84689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102842836390500