Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq5 248 1e-60
>seq5
Length=693879
Score = 248 bits (274), Expect = 1e-60
Identities = 1120/1753 (64%), Gaps = 69/1753 (4%)
Strand=Plus/Plus
Query 113602 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTT 113661
||||||||| ||||||||||| ||| | |||||| | | ||||| || | | |||
Sbjct 202362 GTAGTACATGCCCGTCTTGAGGCCCAGTTTCCAGCCGGTAAAGTGCATGGAAGTGATCTT 202421
Query 113662 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 113721
| | || ||| | |||| | ||| | | ||||| || |||||||| ||
Sbjct 202422 GCCCATAGTGGGATCCTTCATGTGAATGTTAAGAGACTGGGACTGGTCGATGAAAGCACC 202481
Query 113722 ACGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAG 113779
||| || || ||||| | | || | || | || ||||||| |||||| |||||
Sbjct 202482 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 202539
Query 113780 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACC 113839
|| || || || | ||||| | |||||| || ||||| ||| || | |
Sbjct 202540 AGAGCTTTGATGTCGGCCGGGATGTTGGGGATATTCTGAATGGA---ACCGTTCTCGGCA 202596
Query 113840 ATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 113896
|||| | | ||||||| | | ||||| || || || | |||||| | || ||
Sbjct 202597 ATGATACGGTTCTTCATAGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTCAGCAGC 202656
Query 113897 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 113956
|||||||| || ||||| || ||| || | | || || |||| ||||
Sbjct 202657 CAGGGGTTGACAACCTGGAATTCACCTGCCAGGACACGGCGTTGGTAAATGTTGGACGTG 202716
Query 113957 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016
|| ||||| ||||||||||||||||| | || || | ||| || || || ||||||||
Sbjct 202717 TAAGGCTCGAAGCACTCATTGTTACCTAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 202776
Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076
|| | || || ||| || | || | ||| | || | ||||| || | |||
Sbjct 202777 GCGAGCAGCAGTGAGTTGCGAATTCCATGCTCCTTGATCTGCTCCTTCAGACTATTCCAC 202836
Query 114077 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCT 114136
|| || | | || | | | |||||| |||||||| || || || | ||||||
Sbjct 202837 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCAAACTGAAGAATGCCCTCGGAGGCG 202896
Query 114137 GGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 114193
|| || |||||||| || ||| || || | ||| ||||||||| ||| ||
Sbjct 202897 GGAGAGCCCTCAAAGGTAGAGTAAGGTCCTTGCTCCTTGGCCAATTCGACAGAG---GCA 202953
Query 114194 TCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 114253
|||||| || || || || |||||||| || | || | | |||||| |
Sbjct 202954 GTGAGGGCAGCATGGTAGATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCCTCAGGG 203013
Query 114254 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313
|| ||||| | | || | || || | || |||||||| ||||| || | |||
Sbjct 203014 GACTCAAATGGCATGCGCAAGGCAAGGAAAGCGTCGGCGAGACCCTGGACGCCAACACCA 203073
Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 114373
|| || || |||| ||| || || || || || ||||| || || |||
Sbjct 203074 ATCGGCCGGTGTCGCATGTTGCTGTTCCGGGCCTCCTGGACGGGGTAGTGGTTGACATCA 203133
Query 114374 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 114433
|| | || || || || || |||| |||| || || ||||| | | | ||
Sbjct 203134 ATGATTCTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCG 203193
Query 114434 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACA 114489
| ||| ||| | | | | ||| ||| ||| || | || |||| || ||
Sbjct 203194 TA---GCGTCCCTCGTTGTAGTC-TACGAAGGCAGGCAGAGCCAGAGAGGCCAAGTTGCA 203249
Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549
|||| | |||||| ||| |||||| | ||||||||| || | || || ||
Sbjct 203250 AACAGCGACCTCATCAGGGGCAGAGTACTCGACAATTTCCGTGCAAAGGTTGGAGCTGCG 203309
Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609
|| || ||||||||||| || || ||| |||| || ||||||||||| |||||| |
Sbjct 203310 GATTGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAA 203369
Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668
|| | |||||||| || |||| || || || | | ||||| | || | ||||
Sbjct 203370 AGGATTACCCGTCTCTGTCTGGGCCTCCAGGATGGAGTACCAGAGCTTCTG-----GGCA 203424
Query 114669 C-AGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAGGGCTTCAAAC 114721
| | ||| | || || |||| |||| ||| |||||| ||||| || ||||||
Sbjct 203425 CGAATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTTTCATAGAGAGCCTCAAAC 203481
Query 114722 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTG 114780
|| || || | || | || || || || || | ||||| | |||| ||| |
Sbjct 203482 TCCTCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATC 203540
Query 114781 ACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATC 114840
||| || ||| || ||||||||||| || || || ||||| ||||| ||| | |||
Sbjct 203541 ACCGTTCTTCTCGACGCGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATC 203600
Query 114841 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 114900
||| || ||||||| | || ||||| ||||| || | || || | | |||
Sbjct 203601 ACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGCAAATCAAGGAACTCAAACACATC 203660
Query 114901 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTG 114954
|||||||| || |||| ||| | || | | || | | || ||| ||||
Sbjct 203661 GGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCGCC---AGGTCGCTTGTTGCCACCCTG 203717
Query 114955 GTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTG 115014
|| ||||| || || ||| || || || |||||||| ||||||| ||||| ||
Sbjct 203718 GTCGACATATCTGGCCGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGT 203777
Query 115015 GCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCA 115072
|| || || || || || ||| | | |||| | | |||| | || ||
Sbjct 203778 CCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCGCGAATGCGGTGGACATTCAAGCCG 203835
Query 115073 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCG 115132
||||| || ||| ||| ||||| ||||| | |||| || | ||||| || |||
Sbjct 203836 ATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCG 203895
Query 115133 ATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT--GGTGTAC 115190
|| ||| |||| | ||| |||||||| ||||| || | || ||||| |
Sbjct 203896 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGACGACA--GCTGACATTGAGGTGTGC 203953
Query 115191 CAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTATCGTA 115248
|||||||||| || || |||| ||||| |||| | | || |||||| || |||
Sbjct 203954 CAGCGTTGAATAGTGTGGGTGAGGCGTGTGTGAAGAGTTTGCT--GGACATGAGATGGTA 204011
Query 115249 GGTCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAA 115305
||| |||| ||| | | ||||| ||| | || |||| | ||| |||||||
Sbjct 204012 GGTTTCCAGGACTCGCTCAATATTGTCTCCCCAG---ATCCCGACAGCGACACGCATAAT 204068
Query 115306 CATGTATTGGGGT 115318
||||| ||||||
Sbjct 204069 CATGTGCTGGGGT 204081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597333962000400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |