Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 163 3e-35 >seq5 Length=693879 Score = 163 bits (180), Expect = 3e-35 Identities = 585/912 (64%), Gaps = 2/912 (0%) Strand=Plus/Minus Query 93724 TACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGGGTTTCC 93783 ||||||| |||||| ||| ||||| ||| || || |||||| | | |||| | || | Sbjct 204146 TACTTTGGCTTCAAGACTTTGGAGCGGTCATATCTTCTCAAGCTCAACGGCAAGATTGTC 204087 Query 93784 GAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGACATGCCG 93843 |||||||| || || || | ||||| ||||| ||||||| || || | || | Sbjct 204086 GAGCGACCCCAGCACATGATTATGCGTGTCGCTGTCGGGATCTGGGGAGACAATATTGAG 204027 Query 93844 AATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCACCCCGACC 93903 || || | | | |||| ||| | || ||| | || || Sbjct 204026 CGAGTCCTGGAAACCTACCATCTCATGTCCAGCAAACTCTTCACACACGCCTCACCCACA 203967 Query 93904 CTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GACGAACAA 93962 || |||||||| || || || ||| |||| || || ||||| | ||| | || Sbjct 203966 CTATTCAACGCTGGCACACCTCAATGTCAGCTGTCGTCTTGCTTCCTCGTCGAC-ATGAA 203908 Query 93963 GGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATA 94022 || ||| |||| || || | |||| |||||| ||| || | ||||| || Sbjct 203907 GGAGGACAGCATCGAGGGCATCTATGACACGCTCAAGACCTGCGCCATGATCTCCAAGAT 203848 Query 94023 CGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGG 94082 || || || ||||| | | ||||||| | | || |||| || |||||||| ||| Sbjct 203847 GGCTGGTGGTATCGGCTTGAATGTCCACCGCATTCGCGCCACTGGCTCCTACATTGCCGG 203788 Query 94083 TACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCG 94142 ||||| || || ||||| || || | || ||||| || || ||||||||| |||| | Sbjct 203787 CACCAACGGGACGTCCAATGGTGTCATTCCCATGCTTCGTGTTTTCAACAACACGGCCAG 203728 Query 94143 CTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTG 94202 || || ||||||||||| | | | || |||| || | || | ||||| || Sbjct 203727 ATATGTCGACCAGGGTGGCAACAAGCGACCTGGCGCTTTTGCCATTTACTTGGAGCCTTG 203668 Query 94203 GCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAG 94262 |||||| || ||| | ||| | || |||||||||| |||||||| || | | Sbjct 203667 GCACGCCGATGTGTTTGAGTTCCTTGATTTGCGAAAGAATCACGGCAAGGAAGAAGTCCG 203608 Query 94263 GGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAA 94322 || | || | ||| ||||| ||| | || || ||||| ||||| ||||||||||| Sbjct 203607 TGCTCGTGATTTATTCCTTGCTCTTTGGATTCCCGATCTTTTCATGAAGCGCGTCGAGAA 203548 Query 94323 AAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGG 94382 ||| | |||| ||| | || ||||| ||||| ||||| ||| | ||| | || Sbjct 203547 GAACGGTGATTGGACTCTGATGTGCCCCAACGAATGCCCCGGCCTGGCTGACTGCTACGG 203488 Query 94383 ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTAT 94442 | ||||| | | |||| || || ||||||||| | | || Sbjct 203487 CGAGGAGTTTGAGGCTCTCTATGAAAAGTATGAGCGTGAGGGCAAGGGTCGTGCGACCAT 203428 Query 94443 GGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTA 94502 ||| |||||| ||| | ||| |||| | ||| |||||||||| || | Sbjct 203427 TCGTGCCCAGAAGCTCTGGTACTCCATCCTGGAGGCCCAGACAGAGACGGGTAATCCTTT 203368 Query 94503 CATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAA 94562 ||| | | |||||| | |||| ||| ||||||| || || | || ||| Sbjct 203367 CATGCTCTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACTTGGGAACAATCCG 203308 Query 94563 GAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTG 94622 ||||| || || ||||| || ||||||||||| || | || || ||| | ||||| || Sbjct 203307 CAGCTCCAACCTTTGCACGGAAATTGTCGAGTACTCTGCCCCTGATGAGGTCGCTGTTTG 203248 Query 94623 TAACCTGGGCTC 94634 ||| ||| ||| Sbjct 203247 CAACTTGGCCTC 203236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494706935974800