Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq20 127 2e-24
>seq20
Length=366416
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319
||| | |||||| || || || || || || || |||||||||| || | | | || ||
Sbjct 156394 AACAAGATGAAGTGTGGACTCCTTCTGGATGTTATAATCGGCGAGCGTACGGCCGTCTTC 156453
Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379
||| || || || || || |||| |||||| || || || ||||||||||| || |||||
Sbjct 156454 CAACTGTTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCTTG 156513
Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439
||| ||| ||| ||| | || | ||| ||||| | |||||| || || || | || ||
Sbjct 156514 AATCTTTGATTTGACATTGTCGATAGTATCAGAAGATTCCACCTCGAGGGTAATGGTCTT 156573
Query 101440 GCCGGTTAAAGTTTTTACAAATA 101462
||||| ||||| || |||| ||
Sbjct 156574 TCCGGTCAAAGTCTTGACAACTA 156596
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
||||| || || || || | ||| || || || || || ||||| || || | || |
Sbjct 156158 AAACGCAACACCAAGTGCAAGGTTGACTCCTTCTGAATGTTGTAGTCTGCAAGTGTCCGT 156217
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
|||| || | || || || || || || | |||||| || ||||| ||||||||||||
Sbjct 156218 CCATCCTCAAGCTGTTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGAGGAATGCCTTCT 156277
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
|| |||||||| ||| || || | |||| |||||||| | |||||| ||||| |||
Sbjct 156278 TTGTCTTGAATCTTTGACTTCACGTTGTCTATTGTGTCAGAAGATTCCACCTCAAGGGTG 156337
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || || || || | || || || || ||||||||
Sbjct 156338 ATGGTCTTTCCTGTGAGGGTCTTGACGAAGATCTGCAT 156375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396265698038910
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |