Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq11 271 1e-67 seq37 214 2e-50 seq20 183 4e-41 seq13 165 1e-35 seq3 154 2e-32 seq4 147 3e-30 seq45 127 3e-24 seq9 93.3 6e-14 >seq11 Length=468793 Score = 271 bits (300), Expect = 1e-67 Identities = 555/815 (68%), Gaps = 15/815 (2%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 ||| | ||||| ||| | || || |||||||| || || || | ||||| || | | Sbjct 68098 GCTATGCGTCGTCTTCGCACGGCCTGTGAACGAGCGAAGCGTGCCCTCTCCGCT-CAACA 68040 Query 196121 CAA-ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTAC 196179 ||| |||| |||||||||||||||||||| || || ||||||| || || | ||||| Sbjct 68039 CAACACAAACGTTGAGATTGATTCGTTGTTCGAGGGCATTGACTACTCCGCACCGATTAC 67980 Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGA 196239 |||||| ||||| ||||| || | ||| |||| | | | | ||||| || Sbjct 67979 CCGTGCCCGTTTCGAAGAACTATGCCAAGATCTGTTCCGATCTACTCTCCAGCCTGTGGA 67920 Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299 | || || |||||| || | || |||||| | || | || ||||| || ||||| Sbjct 67919 TCGCGTCCTCACTGACGCCAAACTCGACAAGTCTCAAGTCCACGACATTGTTCTAGTGGG 67860 Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGC---TTCTTCAATAATAA 196356 ||| || || || ||||| |||| || || |||| | ||||||| || Sbjct 67859 AGGCTCTACTCGGATTCCTCGTGTTCA---GAATCTCATTAGCGACTACTTCAATGGCAA 67803 Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416 | | ||||| |||||||| || || || || || |||| || || || ||||| Sbjct 67802 AACGCCCAGCAAAAGCATCAACCCTGACGAGGCTGTAGCCAATGGCGCTGCTGTACAGGC 67743 Query 196417 TGCTATTCTCTCAGGTGTTGACAATAATAACGTC--CAA--GATCTTCTGCTACTTGATG 196472 |||||| | || || | | || | | | ||| ||| || | |||| ||||| | Sbjct 67742 TGCTATCTTGTCTGGAGAT-ACTACATCCAAGTCAACAAACGAAATCTTGCTTCTTGACG 67684 Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532 ||||||| | || || || ||||||| || |||||| | ||||| || | ||| | Sbjct 67683 TTGCACCTCTCTCACTAGGCATTGAAACTGCTGGTGGTATGATGACAAAGTTGATTCCTC 67624 Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAA 196591 | |||||||| ||||| || |||||| | || | ||||| |||| ||| ||||| || Sbjct 67623 GAAACACAACCATTCCCACAAAGAAG-ACTGAGACGTTTTCGACGTTTTCAGATAACCAG 67565 Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651 || || || | |||||||| || || || || ||| || | ||||| ||| | | Sbjct 67564 CCTGGCGTCCTCATTCAAGTGTACGAGGGTGAGCGCCAGCGCACTAAGGACAACAACTTG 67505 Query 196652 CTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAAT 196711 | || | ||||| | || || ||||| | || ||| | || ||||| |||||| | Sbjct 67504 ATGGGCAAATTCGAACTTACTGGCATTCCTCCCGCGCCCCGCGGAGTTCCTCAGATTGAA 67445 Query 196712 GTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCT 196771 ||| || ||| | || || ||||| || | ||||| | ||| ||| || | | || Sbjct 67444 GTTACATTTGATCTTGATGCCAATGGTATCATGAACGTGTCCGCTCTGGAGAAAGGTACT 67385 Query 196772 GGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831 ||||| || | |||||||| || |||||||||||||| || || || ||||| || || Sbjct 67384 GGCAAGTCCAACAAGATTGTCATCACCAATGACAAGGGTCGTCTGTCCAAGGAAGAGATC 67325 Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGA 196866 || || ||||| || || ||||| | || ||| Sbjct 67324 GAGCGCATGGTAGCTGAAGCTGAAAAATTCAAGGA 67290 Score = 161 bits (178), Expect = 1e-34 Identities = 209/286 (73%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763 |||||||| || || ||||| || || ||||| | || || || || || ||||| ||| Sbjct 68515 AAAGATGCTGTAGTCACTGTTCCAGCATACTTTAACGACTCGCAGCGTCAAGCGACCAAG 68456 Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGC 195822 ||||||| | | ||||| || | ||| |||| | || || ||||| || || || || Sbjct 68455 GACGCTGGTACCATTGCCGGAATCAACA-TCTTGCGTATCATTAATGAGCCCACTGCTGC 68397 Query 195823 TGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGA 195882 || ||||| || || || |||||||| || | || ||||| |||||||||| Sbjct 68396 AGCTATTGCGTACGGCCTTGACAAGAAGGCTGAAGGCGAGCGCAATGTGCTGATCTTTGA 68337 Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942 || || || ||||| |||||||| || || | | |||||||| || || || ||||| Sbjct 68336 CCTTGGCGGAGGTACCTTTGATGTGTCTCTCTTGACTATTGAAGACGGAATCTTTGAAGT 68277 Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 ||||| ||||||||||| || || | |||||||| ||||| ||| Sbjct 68276 GAAGGCCACTGCTGGTGACACCCACTTGGGTGGTGAGGATTTTGAT 68231 >seq37 Length=257599 Score = 214 bits (236), Expect = 2e-50 Identities = 749/1148 (65%), Gaps = 41/1148 (4%) Strand=Plus/Plus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 ||||| ||||| || || || || | || || || ||||| ||| || ||||| | Sbjct 182538 CAACGTCAGGCTACCAAAGATGCCGGTGTCATCGCCGGTCTCAACGTCCTCCGAATTGTG 182597 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || || ||||| ||||||||||||| ||| || | | | Sbjct 182598 AACGAGCCCACCGCCGCCGCCATCGCTTACGGTCTGGACAAGACTGAGGGAGA-GCGACA 182656 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 ||| || | | | |||||| ||||||||||| || |||||||| || || ||||| Sbjct 182657 AATC-ATCGTT-TATGATCTTGGTGGTGGTACTTTCGATGTCTCCCTCCTTTCCATTGAT 182714 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 ||| | ||||| || ||||||||||||||| |||||||| ||||||||||||||| Sbjct 182715 CAGGGTGTTTTCGAGGTCCTGGCTACTGCTGGTGACACTCATCTGGGTGGTGAAGATTTC 182774 Query 195986 GA--TGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGA-AAGAATAAGAA---A 196039 || || | || | | || || | | || || | | ||||| || || Sbjct 182775 GACCAGCGCATCATTAAC--CACTTCGC-CAAGA---CCTACAATAAGAAGAACAATGTC 182828 Query 196040 GATATTTC--TGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCA 196097 |||||| | ||| || | |||| | || ||| | | || ||| |||| Sbjct 182829 GATATTACCAAGGACCTC--AAGGCTATGGGTAAGCTCAAGCGTGAGGCTGAGAAGGCCA 182886 Query 196098 AACGAACTCTCTCTTCTACGGCTCAAACAATGG--TTGAGATTGATTCGTTGTTTGACGG 196155 | || ||||| |||||| | | | | || | | | || ||||| | || ||||| || Sbjct 182887 AGCGTACTCTGTCTTCT-CAGAT-GAGCACTCGTATCGAAATTGAAGCTTTTTTTGAGGG 182944 Query 196156 AATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT 196215 | ||| |||| || | ||||| || || || ||| | ||| |||||||| Sbjct 182945 CAATGATTTCTCAGAGACGTTGACCCGCGCCAAGTTCGAGGAGCTCAACATGGATTTGTT 183004 Query 196216 TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAA 196275 | |||| || | |||||||| || || || ||||| || | | ||| || | Sbjct 183005 CAAGAAGACCATCAAGCCTGTTGAGCAGGTCCTGAAGGACGCCAATGTCAAGAAGACTGA 183064 Query 196276 GGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCT 196335 | | || || ||||| || || || || || ||||||||||| ||| | || | | Sbjct 183065 GATCGACGACATTGTTCTCGTCGGTGGCTCCACCCGTATTCCCAAGGTCCAGGCCCTCAT 183124 Query 196336 TTCTAGCTTCTTCAAT---AATAAAGATTTAAACAAAACG-ATCAACCCGGATGAAGCAG 196391 | ||||| | || || | | | || | |||||||| ||||| || | Sbjct 183125 TGAGGAGTTCTTTGGTGGCAAGAAGGCCT----CGAAGGGTATCAACCCCGATGAGGCCG 183180 Query 196392 TTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCC 196451 |||| | |||||| ||||| ||||||| | |||| || || | || || | | | Sbjct 183181 TTGCCTTTGGTGCCGCCGTCCAGGCTGGTGTTCTTTCCGGCGAGGAAGGTACTGAGG--- 183237 Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTAT--CCCTGGGTCTTGAAACAGCGGGTGG 196509 ||||| | || | ||||| || || | | | || || |||| || | ||||| Sbjct 183238 -AGATC--GTTCTCATGGATGT--CAACCCTCTGACTCTTGGCATTGAGACCACTGGTGG 183292 Query 196510 TGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTT 196569 |||||||| || | ||| | ||||| ||||||| ||| ||| || |||| Sbjct 183293 AGTTATGACCAAGTTGATTCCCCGCAACACTCCTATTCCTACTCGCAAGAGCCAGATCTT 183352 Query 196570 TTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTC 196629 || || | | ||||| || || | || | ||| || || || || || ||||| || Sbjct 183353 CTCTACCGCTGCTGATAACCAGCCTGTGGTCCTTATCCAGGTCTACGAGGGCGAACGATC 183412 Query 196630 CCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACC 196689 | | ||||||||| || ||||||| ||||| | || || ||||| | || || Sbjct 183413 TCTCACCAAGGATAACAATAACCTTGGAAAGTTCGAGCTCACAGGCATTCCCCCCGCTCC 183472 Query 196690 CAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749 | |||||||| || ||| | || | ||||| | || || ||||| ||||| || || Sbjct 183473 TCGCGGTGTTCCTCAAATTGAGGTGTCGTTCGAGCTGGATGCCAATGGCATTCTCAAAGT 183532 Query 196750 CACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGG 196809 | |||| | ||||||| ||||||| || || || || ||||||||||| Sbjct 183533 CTCAGCCCACGACAAGGGCACTGGCAAGCAAGAGTCTATCACTATCACGAATGACAAGGG 183592 Query 196810 GCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGA 196869 || | | |||||||||| || || |||||| || || || |||||| || || Sbjct 183593 TCGTTTGACCCAGGAGGAAATCGACCGCATGGTTGCTGAGGCCGAGAAGTACGCCGAGGA 183652 Query 196870 AGACGAGG 196877 ||| ||| Sbjct 183653 GGACAAGG 183660 >seq20 Length=366416 Score = 183 bits (202), Expect = 4e-41 Identities = 160/199 (80%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||| ||||| || || ||||| || ||||| || |||||||| ||||| || || | Sbjct 156377 GTATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAATCTT 156318 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | |||||||| || ||| | || | ||||||||||| || ||||||||||| ||||| | Sbjct 156317 CTGACACAATAGACAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCCGACC 156258 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 |||| || ||||| || || || ||||||||||| |||||||| || || || || |||| Sbjct 156257 AGCAGCGTCTTATCTTCGCCGGGAAACAGCTTGAGGATGGACGGACACTTGCAGACTACA 156198 Query 172040 ACGTTCAAAAGGAGTCTAC 172058 || |||| |||||||| || Sbjct 156197 ACATTCAGAAGGAGTCAAC 156179 Score = 181 bits (200), Expect = 1e-40 Identities = 181/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || ||||||||||| || || || ||||| || ||||| ||||| || Sbjct 156893 ATGCAGATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 156834 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| |||||||||| || ||||| || ||||| || || || Sbjct 156833 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCAA 156774 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||||||||| || |||||||| || || || |||||||| || |||||| Sbjct 156773 CAGCGTCTGATTTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAAC 156714 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 | || ||||| || ||||| || ||||| || | || || ||||| ||||| Sbjct 156713 ATCCAGAAGGAATCAACTCTCCATCTTGTGCTCCGCCTCCGTGGTGGCATGCAA 156660 Score = 172 bits (190), Expect = 7e-38 Identities = 169/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171872 TTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCG 171931 |||| || || | || ||||| || || ||||||||||| || || || || || |||| Sbjct 156593 TTGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTGGAATCTTCTGATACTATCG 156534 Query 171932 ATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTA 171991 | || ||||| | ||||||||||| |||||||||||||| || || ||||| || || | Sbjct 156533 ACAATGTCAAATCAAAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGA 156474 Query 171992 TTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051 |||| ||||| |||||| | ||||| || ||||| ||||| ||||| ||| | || |||| Sbjct 156473 TTTTCGCTGGCAAACAGTTGGAAGACGGCCGTACGCTCGCCGATTATAACATCCAGAAGG 156414 Query 172052 AGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| || || || |||||||| | || || || ||| Sbjct 156413 AGTCCACACTTCATCTTGTTCTCCGCCTCCGTGGCGGT 156376 >seq13 Length=451911 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||||||||| ||||| || Sbjct 17501 ATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 17442 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||| || || || ||||| ||||| || || || ||| Sbjct 17441 GACACCATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 17382 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||||| || |||||||| || ||||| || ||||| || ||||| || || |||||| Sbjct 17381 CAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTACAAC 17322 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||| || || ||| | || || | || || ||||||| Sbjct 17321 ATCCAGAAGGAGAGCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGGTG 17273 >seq3 Length=769506 Score = 154 bits (170), Expect = 2e-32 Identities = 470/720 (65%), Gaps = 11/720 (2%) Strand=Plus/Plus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| ||||| ||||||| || || || ||||| || ||||| || | ||| ||| Sbjct 485295 ACTGTTCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCCGGTGCCATT 485354 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| || | || || || ||||| || || || || || || |||||| Sbjct 485355 GCTGGCCTCAACGTCCTCCGTATCATTAACGAACCCACTGCCGCCGCCATCGCATATGGT 485414 Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 |||| | |||| || | || || || |||||| |||||| ||||||||| Sbjct 485415 CTGGGCTCTGGCAAGTCTGAGAAGGAGCGTAACGTTCTGATCTATGATCTTGGTGGTGGT 485474 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || || ||||| || || || || || | || ||| | ||| || ||||| || ||| Sbjct 485475 ACCTTCGATGTGTCTCTCCTTAACATCCAGGGCGGTGTTTTCACTGTCAAGGCCACCGCT 485534 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG-TCTT-CTCCGTCATTTGTCTG 196013 ||||| || || || |||||| | |||||||| |||| ||| ||| || | Sbjct 485535 GGTGACACCCACCTTGGTGGTCAGGATTTCGA--CACGAACTTGCTCGACCACTGCAAGA 485592 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 | || ||| || |||| ||||| ||| | || || | | ||||| || | | Sbjct 485593 AGGAATTCACCCGCAAGACCAAGAAGGATCTAAGCGGCGATGCCCGTGCTCTGCGAAGAC 485652 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 || | ||||| || || |||||||| || || || || || || | | | | Sbjct 485653 TTCGAACTGCTTGCGAGCGTGCCAAGCGTACCCTGTCAAGCGGCGCCCAGGCTACCATCG 485712 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 ||||||| || | || || || |||||| | || || ||||| ||||||| Sbjct 485713 AGATTGACTCTCTCTTCGATGGCGAGGACTTCACCCTGTCCATGACTCGTGCTCGTTTTG 485772 Query 196194 AAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251 | || || ||| | | ||| || | | || ||||| | || || ||| Sbjct 485773 AGGACTTGAACGCCAAGGCGTTCGCTGGCA--CCCTCGAGCCTGTCGCCCAGGTCCTTAA 485830 Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311 || || || || ||| || ||||| || |||||| | || || || || ||||| Sbjct 485831 GGATGCTGCCATTGAAAAGGCTGCTGTTGAGGAGATTGTCTTGGTCGGTGGCTCCACCCG 485890 Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAAC 196371 ||| || |||||||| || | || || |||||| | || | | | || | Sbjct 485891 TATCCCCAAGATTCAGAAGCTTCTGTCCGAGTTCTTCGACGGCAAGAAGCTCGAGAAGAG 485950 Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| |||||||| || || || ||||| || || ||||| | ||||||||| || Sbjct 485951 CATCAACCCCGATGAAGCCGTCGCCTACGGTGCCGCTGTCCAGGCCGGTATTCTCTCCGG 486010 >seq4 Length=697727 Score = 147 bits (162), Expect = 3e-30 Identities = 141/181 (78%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || || || ||| | || || || || |||||||| ||||| ||||| || ||||||||| Sbjct 592124 TTCGTCAAGACCTTGACGGGTAAGACCATCACCCTAGAGGTCGAGTCCTCTGACACAATC 592183 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || ||||| ||||||| || |||||||| || ||||| || || ||||| ||| | Sbjct 592184 GACAATGTCAAATCCAAGATACAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCGATTG 592243 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || |||||||| || |||||||| ||||| || ||||| || || ||||| | || ||| Sbjct 592244 ATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTGGCAGACTACAATATCCAGAAG 592303 Query 172051 G 172051 | Sbjct 592304 G 592304 >seq45 Length=208147 Score = 127 bits (140), Expect = 3e-24 Identities = 225/329 (68%), Gaps = 12/329 (4%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || |||| || || |||| || | ||||| || ||| Sbjct 22595 AAGATGAAGGAGACCGCTGAGTCTTATCTGTCCAAGCCTGTCAAGAACGCAGTGGTCACT 22654 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || |||| |||| | || || ||| || ||||| |||| ||||| Sbjct 22655 GTGCCTGCCTATTTCAATGATGCCCAGCGTCAGAGTACCAAGGATGCTGGCCAGATTGCC 22714 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| ||| | || |||| || || || || ||||| |||| || ||||| Sbjct 22715 GGCCTGAACGTACTTCGTGTTGTCAACGAGCCTACCGCTGCTGCCCTTGCGTACGGTCTA 22774 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATT---GATCTTTGATCTCGGTGGTGGTACG 195898 || ||| ||||| | | ||| | ||| ||||| ||||||||||| Sbjct 22775 GATAAG---------CAAGATGACAGTGTCGTCGCTGTCTACGATCTTGGTGGTGGTACT 22825 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || ||| |||| |||| | ||| | ||| |||||||||| ||| | || |||| Sbjct 22826 TTCGATATCTCTATTCTGGAGATTCAGAATGGCGTATTCGAAGTCAAGTCGACCAATGGT 22885 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || ||||| || |||||||| ||||| Sbjct 22886 GACACGCATCTTGGCGGTGAAGACTTCGA 22914 >seq9 Length=558614 Score = 93.3 bits (102), Expect = 6e-14 Identities = 159/226 (70%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 || || || || ||| | ||||| || | || |||||||| ||||| ||| | ||| Sbjct 366393 ATTCCTCGCGGAGCTATCCTCGCGGGACCTCCAGGTACTGGCAAAACGCTTATTGCTAAA 366334 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665 || | || |||||||| |||| || || ||| || | | |||| ||| ||| | Sbjct 366333 GCCACGGCAGGTGAATCTGGTGTTCCATT-CTTTAGCG-TAAGCGGTTCCGAATTTG-TA 366277 Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725 || ||||| |||||||||||| || || ||||| || || |||| ||| || | Sbjct 366276 GAAATGTTTGTTGGTGTTGGTCCTTCACGGGTCCGAGATCTATTTGCCGAAGGTCGCAAG 366217 Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTA 198771 ||| ||| || ||||| ||||||||||| || || || |||||| Sbjct 366216 AATGCACCCTGCATCATTTTCATTGATGAAATCGATGCCATTGGTA 366171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657840772773600