Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq11 271 1e-67
seq37 214 2e-50
seq20 183 4e-41
seq13 165 1e-35
seq3 154 2e-32
seq4 147 3e-30
seq45 127 3e-24
seq9 93.3 6e-14
>seq11
Length=468793
Score = 271 bits (300), Expect = 1e-67
Identities = 555/815 (68%), Gaps = 15/815 (2%)
Strand=Plus/Minus
Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120
||| | ||||| ||| | || || |||||||| || || || | ||||| || | |
Sbjct 68098 GCTATGCGTCGTCTTCGCACGGCCTGTGAACGAGCGAAGCGTGCCCTCTCCGCT-CAACA 68040
Query 196121 CAA-ACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTAC 196179
||| |||| |||||||||||||||||||| || || ||||||| || || | |||||
Sbjct 68039 CAACACAAACGTTGAGATTGATTCGTTGTTCGAGGGCATTGACTACTCCGCACCGATTAC 67980
Query 196180 CCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGA 196239
|||||| ||||| ||||| || | ||| |||| | | | | ||||| ||
Sbjct 67979 CCGTGCCCGTTTCGAAGAACTATGCCAAGATCTGTTCCGATCTACTCTCCAGCCTGTGGA 67920
Query 196240 ACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGG 196299
| || || |||||| || | || |||||| | || | || ||||| || |||||
Sbjct 67919 TCGCGTCCTCACTGACGCCAAACTCGACAAGTCTCAAGTCCACGACATTGTTCTAGTGGG 67860
Query 196300 AGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGC---TTCTTCAATAATAA 196356
||| || || || ||||| |||| || || |||| | ||||||| ||
Sbjct 67859 AGGCTCTACTCGGATTCCTCGTGTTCA---GAATCTCATTAGCGACTACTTCAATGGCAA 67803
Query 196357 AGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGC 196416
| | ||||| |||||||| || || || || || |||| || || || |||||
Sbjct 67802 AACGCCCAGCAAAAGCATCAACCCTGACGAGGCTGTAGCCAATGGCGCTGCTGTACAGGC 67743
Query 196417 TGCTATTCTCTCAGGTGTTGACAATAATAACGTC--CAA--GATCTTCTGCTACTTGATG 196472
|||||| | || || | | || | | | ||| ||| || | |||| ||||| |
Sbjct 67742 TGCTATCTTGTCTGGAGAT-ACTACATCCAAGTCAACAAACGAAATCTTGCTTCTTGACG 67684
Query 196473 TTGCACCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATA 196532
||||||| | || || || ||||||| || |||||| | ||||| || | ||| |
Sbjct 67683 TTGCACCTCTCTCACTAGGCATTGAAACTGCTGGTGGTATGATGACAAAGTTGATTCCTC 67624
Query 196533 GGAACACAACTATTCCGACTAAGAAGGAACAAGTC-TTTTCAACGTATTCCGATAATCAA 196591
| |||||||| ||||| || |||||| | || | ||||| |||| ||| ||||| ||
Sbjct 67623 GAAACACAACCATTCCCACAAAGAAG-ACTGAGACGTTTTCGACGTTTTCAGATAACCAG 67565
Query 196592 CCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTA 196651
|| || || | |||||||| || || || || ||| || | ||||| ||| | |
Sbjct 67564 CCTGGCGTCCTCATTCAAGTGTACGAGGGTGAGCGCCAGCGCACTAAGGACAACAACTTG 67505
Query 196652 CTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAAT 196711
| || | ||||| | || || ||||| | || ||| | || ||||| |||||| |
Sbjct 67504 ATGGGCAAATTCGAACTTACTGGCATTCCTCCCGCGCCCCGCGGAGTTCCTCAGATTGAA 67445
Query 196712 GTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCT 196771
||| || ||| | || || ||||| || | ||||| | ||| ||| || | | ||
Sbjct 67444 GTTACATTTGATCTTGATGCCAATGGTATCATGAACGTGTCCGCTCTGGAGAAAGGTACT 67385
Query 196772 GGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATT 196831
||||| || | |||||||| || |||||||||||||| || || || ||||| || ||
Sbjct 67384 GGCAAGTCCAACAAGATTGTCATCACCAATGACAAGGGTCGTCTGTCCAAGGAAGAGATC 67325
Query 196832 GAACGTATGGTTCAAGATGCGGAAAAGTACAGGGA 196866
|| || ||||| || || ||||| | || |||
Sbjct 67324 GAGCGCATGGTAGCTGAAGCTGAAAAATTCAAGGA 67290
Score = 161 bits (178), Expect = 1e-34
Identities = 209/286 (73%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 195704 AAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAG 195763
|||||||| || || ||||| || || ||||| | || || || || || ||||| |||
Sbjct 68515 AAAGATGCTGTAGTCACTGTTCCAGCATACTTTAACGACTCGCAGCGTCAAGCGACCAAG 68456
Query 195764 GACGCTGCTGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGC 195822
||||||| | | ||||| || | ||| |||| | || || ||||| || || || ||
Sbjct 68455 GACGCTGGTACCATTGCCGGAATCAACA-TCTTGCGTATCATTAATGAGCCCACTGCTGC 68397
Query 195823 TGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGA 195882
|| ||||| || || || |||||||| || | || ||||| ||||||||||
Sbjct 68396 AGCTATTGCGTACGGCCTTGACAAGAAGGCTGAAGGCGAGCGCAATGTGCTGATCTTTGA 68337
Query 195883 TCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGT 195942
|| || || ||||| |||||||| || || | | |||||||| || || || |||||
Sbjct 68336 CCTTGGCGGAGGTACCTTTGATGTGTCTCTCTTGACTATTGAAGACGGAATCTTTGAAGT 68277
Query 195943 AAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988
||||| ||||||||||| || || | |||||||| ||||| |||
Sbjct 68276 GAAGGCCACTGCTGGTGACACCCACTTGGGTGGTGAGGATTTTGAT 68231
>seq37
Length=257599
Score = 214 bits (236), Expect = 2e-50
Identities = 749/1148 (65%), Gaps = 41/1148 (4%)
Strand=Plus/Plus
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| ||||| || || || || | || || || ||||| ||| || ||||| |
Sbjct 182538 CAACGTCAGGCTACCAAAGATGCCGGTGTCATCGCCGGTCTCAACGTCCTCCGAATTGTG 182597
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
|| || || || || || || || ||||| ||||||||||||| ||| || | | |
Sbjct 182598 AACGAGCCCACCGCCGCCGCCATCGCTTACGGTCTGGACAAGACTGAGGGAGA-GCGACA 182656
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
||| || | | | |||||| ||||||||||| || |||||||| || || |||||
Sbjct 182657 AATC-ATCGTT-TATGATCTTGGTGGTGGTACTTTCGATGTCTCCCTCCTTTCCATTGAT 182714
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
||| | ||||| || ||||||||||||||| |||||||| |||||||||||||||
Sbjct 182715 CAGGGTGTTTTCGAGGTCCTGGCTACTGCTGGTGACACTCATCTGGGTGGTGAAGATTTC 182774
Query 195986 GA--TGCACGTCTTCTCCGTCATTTGTCTGATGAGTTCCGTCGA-AAGAATAAGAA---A 196039
|| || | || | | || || | | || || | | ||||| || ||
Sbjct 182775 GACCAGCGCATCATTAAC--CACTTCGC-CAAGA---CCTACAATAAGAAGAACAATGTC 182828
Query 196040 GATATTTC--TGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCA 196097
|||||| | ||| || | |||| | || ||| | | || ||| ||||
Sbjct 182829 GATATTACCAAGGACCTC--AAGGCTATGGGTAAGCTCAAGCGTGAGGCTGAGAAGGCCA 182886
Query 196098 AACGAACTCTCTCTTCTACGGCTCAAACAATGG--TTGAGATTGATTCGTTGTTTGACGG 196155
| || ||||| |||||| | | | | || | | | || ||||| | || ||||| ||
Sbjct 182887 AGCGTACTCTGTCTTCT-CAGAT-GAGCACTCGTATCGAAATTGAAGCTTTTTTTGAGGG 182944
Query 196156 AATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTT 196215
| ||| |||| || | ||||| || || || ||| | ||| ||||||||
Sbjct 182945 CAATGATTTCTCAGAGACGTTGACCCGCGCCAAGTTCGAGGAGCTCAACATGGATTTGTT 183004
Query 196216 TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAA 196275
| |||| || | |||||||| || || || ||||| || | | ||| || |
Sbjct 183005 CAAGAAGACCATCAAGCCTGTTGAGCAGGTCCTGAAGGACGCCAATGTCAAGAAGACTGA 183064
Query 196276 GGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCT 196335
| | || || ||||| || || || || || ||||||||||| ||| | || | |
Sbjct 183065 GATCGACGACATTGTTCTCGTCGGTGGCTCCACCCGTATTCCCAAGGTCCAGGCCCTCAT 183124
Query 196336 TTCTAGCTTCTTCAAT---AATAAAGATTTAAACAAAACG-ATCAACCCGGATGAAGCAG 196391
| ||||| | || || | | | || | |||||||| ||||| || |
Sbjct 183125 TGAGGAGTTCTTTGGTGGCAAGAAGGCCT----CGAAGGGTATCAACCCCGATGAGGCCG 183180
Query 196392 TTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGACAATAATAACGTCC 196451
|||| | |||||| ||||| ||||||| | |||| || || | || || | | |
Sbjct 183181 TTGCCTTTGGTGCCGCCGTCCAGGCTGGTGTTCTTTCCGGCGAGGAAGGTACTGAGG--- 183237
Query 196452 AAGATCTTCTGCTACTTGATGTTGCACCCGTAT--CCCTGGGTCTTGAAACAGCGGGTGG 196509
||||| | || | ||||| || || | | | || || |||| || | |||||
Sbjct 183238 -AGATC--GTTCTCATGGATGT--CAACCCTCTGACTCTTGGCATTGAGACCACTGGTGG 183292
Query 196510 TGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACAAGTCTT 196569
|||||||| || | ||| | ||||| ||||||| ||| ||| || ||||
Sbjct 183293 AGTTATGACCAAGTTGATTCCCCGCAACACTCCTATTCCTACTCGCAAGAGCCAGATCTT 183352
Query 196570 TTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGAACGCTC 196629
|| || | | ||||| || || | || | ||| || || || || || ||||| ||
Sbjct 183353 CTCTACCGCTGCTGATAACCAGCCTGTGGTCCTTATCCAGGTCTACGAGGGCGAACGATC 183412
Query 196630 CCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACC 196689
| | ||||||||| || ||||||| ||||| | || || ||||| | || ||
Sbjct 183413 TCTCACCAAGGATAACAATAACCTTGGAAAGTTCGAGCTCACAGGCATTCCCCCCGCTCC 183472
Query 196690 CAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGT 196749
| |||||||| || ||| | || | ||||| | || || ||||| ||||| || ||
Sbjct 183473 TCGCGGTGTTCCTCAAATTGAGGTGTCGTTCGAGCTGGATGCCAATGGCATTCTCAAAGT 183532
Query 196750 CACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGG 196809
| |||| | ||||||| ||||||| || || || || |||||||||||
Sbjct 183533 CTCAGCCCACGACAAGGGCACTGGCAAGCAAGAGTCTATCACTATCACGAATGACAAGGG 183592
Query 196810 GCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGA 196869
|| | | |||||||||| || || |||||| || || || |||||| || ||
Sbjct 183593 TCGTTTGACCCAGGAGGAAATCGACCGCATGGTTGCTGAGGCCGAGAAGTACGCCGAGGA 183652
Query 196870 AGACGAGG 196877
||| |||
Sbjct 183653 GGACAAGG 183660
>seq20
Length=366416
Score = 183 bits (202), Expect = 4e-41
Identities = 160/199 (80%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| || || ||||| || ||||| || |||||||| ||||| || || |
Sbjct 156377 GTATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACCATCACCCTTGAGGTGGAATCTT 156318
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| |||||||| || ||| | || | ||||||||||| || ||||||||||| ||||| |
Sbjct 156317 CTGACACAATAGACAACGTGAAGTCAAAGATTCAAGACAAAGAAGGCATTCCTCCCGACC 156258
Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039
|||| || ||||| || || || ||||||||||| |||||||| || || || || ||||
Sbjct 156257 AGCAGCGTCTTATCTTCGCCGGGAAACAGCTTGAGGATGGACGGACACTTGCAGACTACA 156198
Query 172040 ACGTTCAAAAGGAGTCTAC 172058
|| |||| |||||||| ||
Sbjct 156197 ACATTCAGAAGGAGTCAAC 156179
Score = 181 bits (200), Expect = 1e-40
Identities = 181/234 (77%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || ||||||||||| || || || ||||| || ||||| ||||| ||
Sbjct 156893 ATGCAGATTTTCGTCAAAACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCATCT 156834
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| |||||||||| || ||||| || ||||| || || ||
Sbjct 156833 GACACCATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCTCCTGACCAA 156774
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || ||||||||||| || |||||||| || || || |||||||| || ||||||
Sbjct 156773 CAGCGTCTGATTTTTGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTCGCAGACTACAAC 156714
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093
| || ||||| || ||||| || ||||| || | || || ||||| |||||
Sbjct 156713 ATCCAGAAGGAATCAACTCTCCATCTTGTGCTCCGCCTCCGTGGTGGCATGCAA 156660
Score = 172 bits (190), Expect = 7e-38
Identities = 169/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171872 TTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCG 171931
|||| || || | || ||||| || || ||||||||||| || || || || || ||||
Sbjct 156593 TTGTCAAGACTTTGACCGGAAAGACCATTACCCTCGAGGTGGAATCTTCTGATACTATCG 156534
Query 171932 ATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTA 171991
| || ||||| | ||||||||||| |||||||||||||| || || ||||| || || |
Sbjct 156533 ACAATGTCAAATCAAAGATTCAAGACAAGGAAGGCATTCCTCCTGACCAGCAGCGTCTGA 156474
Query 171992 TTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGG 172051
|||| ||||| |||||| | ||||| || ||||| ||||| ||||| ||| | || ||||
Sbjct 156473 TTTTCGCTGGCAAACAGTTGGAAGACGGCCGTACGCTCGCCGATTATAACATCCAGAAGG 156414
Query 172052 AGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|||| || || || |||||||| | || || || |||
Sbjct 156413 AGTCCACACTTCATCTTGTTCTCCGCCTCCGTGGCGGT 156376
>seq13
Length=451911
Score = 165 bits (182), Expect = 1e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || ||||| || || || || |||||||||||||| ||||| ||
Sbjct 17501 ATGCAGATTTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTCGAGGTGGAGTCTTCC 17442
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| ||| |||| |||| || || || ||||| ||||| || || || |||
Sbjct 17441 GACACCATCGACAACGTCAAGTCCAAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 17382
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||||| || |||||||| || ||||| || ||||| || ||||| || || ||||||
Sbjct 17381 CAGCGACTCATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGGCCGACTACAAC 17322
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090
| || |||||| || || ||| | || || | || || |||||||
Sbjct 17321 ATCCAGAAGGAGAGCACCCTGCACTTGGTGCTGCGCCTGCGTGGTGGTG 17273
>seq3
Length=769506
Score = 154 bits (170), Expect = 2e-32
Identities = 470/720 (65%), Gaps = 11/720 (2%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| ||||| ||||||| || || || ||||| || ||||| || | ||| |||
Sbjct 485295 ACTGTTCCTGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCCGGTGCCATT 485354
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| || | || || || ||||| || || || || || || ||||||
Sbjct 485355 GCTGGCCTCAACGTCCTCCGTATCATTAACGAACCCACTGCCGCCGCCATCGCATATGGT 485414
Query 195839 CTGGACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|||| | |||| || | || || || |||||| |||||| |||||||||
Sbjct 485415 CTGGGCTCTGGCAAGTCTGAGAAGGAGCGTAACGTTCTGATCTATGATCTTGGTGGTGGT 485474
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || ||||| || || || || || | || ||| | ||| || ||||| || |||
Sbjct 485475 ACCTTCGATGTGTCTCTCCTTAACATCCAGGGCGGTGTTTTCACTGTCAAGGCCACCGCT 485534
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACG-TCTT-CTCCGTCATTTGTCTG 196013
||||| || || || |||||| | |||||||| |||| ||| ||| || |
Sbjct 485535 GGTGACACCCACCTTGGTGGTCAGGATTTCGA--CACGAACTTGCTCGACCACTGCAAGA 485592
Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073
| || ||| || |||| ||||| ||| | || || | | ||||| || | |
Sbjct 485593 AGGAATTCACCCGCAAGACCAAGAAGGATCTAAGCGGCGATGCCCGTGCTCTGCGAAGAC 485652
Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133
|| | ||||| || || |||||||| || || || || || || | | | |
Sbjct 485653 TTCGAACTGCTTGCGAGCGTGCCAAGCGTACCCTGTCAAGCGGCGCCCAGGCTACCATCG 485712
Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193
||||||| || | || || || |||||| | || || ||||| |||||||
Sbjct 485713 AGATTGACTCTCTCTTCGATGGCGAGGACTTCACCCTGTCCATGACTCGTGCTCGTTTTG 485772
Query 196194 AAGAGTTAAACTCTGATTTGTT--TAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCG 196251
| || || ||| | | ||| || | | || ||||| | || || |||
Sbjct 485773 AGGACTTGAACGCCAAGGCGTTCGCTGGCA--CCCTCGAGCCTGTCGCCCAGGTCCTTAA 485830
Query 196252 TGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCG 196311
|| || || || ||| || ||||| || |||||| | || || || || |||||
Sbjct 485831 GGATGCTGCCATTGAAAAGGCTGCTGTTGAGGAGATTGTCTTGGTCGGTGGCTCCACCCG 485890
Query 196312 TATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAAC 196371
||| || |||||||| || | || || |||||| | || | | | || |
Sbjct 485891 TATCCCCAAGATTCAGAAGCTTCTGTCCGAGTTCTTCGACGGCAAGAAGCTCGAGAAGAG 485950
Query 196372 GATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431
|||||||| |||||||| || || || ||||| || || ||||| | ||||||||| ||
Sbjct 485951 CATCAACCCCGATGAAGCCGTCGCCTACGGTGCCGCTGTCCAGGCCGGTATTCTCTCCGG 486010
>seq4
Length=697727
Score = 147 bits (162), Expect = 3e-30
Identities = 141/181 (78%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930
|| || || ||| | || || || || |||||||| ||||| ||||| || |||||||||
Sbjct 592124 TTCGTCAAGACCTTGACGGGTAAGACCATCACCCTAGAGGTCGAGTCCTCTGACACAATC 592183
Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990
|| || ||||| ||||||| || |||||||| || ||||| || || ||||| ||| |
Sbjct 592184 GACAATGTCAAATCCAAGATACAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCGATTG 592243
Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050
|| |||||||| || |||||||| ||||| || ||||| || || ||||| | || |||
Sbjct 592244 ATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTGGCAGACTACAATATCCAGAAG 592303
Query 172051 G 172051
|
Sbjct 592304 G 592304
>seq45
Length=208147
Score = 127 bits (140), Expect = 3e-24
Identities = 225/329 (68%), Gaps = 12/329 (4%)
Strand=Plus/Plus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
|||||||||||||| || || |||| || || |||| || | ||||| || |||
Sbjct 22595 AAGATGAAGGAGACCGCTGAGTCTTATCTGTCCAAGCCTGTCAAGAACGCAGTGGTCACT 22654
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| ||||| || |||| |||| | || || ||| || ||||| |||| |||||
Sbjct 22655 GTGCCTGCCTATTTCAATGATGCCCAGCGTCAGAGTACCAAGGATGCTGGCCAGATTGCC 22714
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| || ||| ||| | || |||| || || || || ||||| |||| || |||||
Sbjct 22715 GGCCTGAACGTACTTCGTGTTGTCAACGAGCCTACCGCTGCTGCCCTTGCGTACGGTCTA 22774
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATT---GATCTTTGATCTCGGTGGTGGTACG 195898
|| ||| ||||| | | ||| | ||| ||||| |||||||||||
Sbjct 22775 GATAAG---------CAAGATGACAGTGTCGTCGCTGTCTACGATCTTGGTGGTGGTACT 22825
Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958
|| ||| |||| |||| | ||| | ||| |||||||||| ||| | || ||||
Sbjct 22826 TTCGATATCTCTATTCTGGAGATTCAGAATGGCGTATTCGAAGTCAAGTCGACCAATGGT 22885
Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGA 195987
|| || ||||| || |||||||| |||||
Sbjct 22886 GACACGCATCTTGGCGGTGAAGACTTCGA 22914
>seq9
Length=558614
Score = 93.3 bits (102), Expect = 6e-14
Identities = 159/226 (70%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608
|| || || || ||| | ||||| || | || |||||||| ||||| ||| | |||
Sbjct 366393 ATTCCTCGCGGAGCTATCCTCGCGGGACCTCCAGGTACTGGCAAAACGCTTATTGCTAAA 366334
Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTGCTCCGCGG---CGAGTTTCATC 198665
|| | || |||||||| |||| || || ||| || | | |||| ||| ||| |
Sbjct 366333 GCCACGGCAGGTGAATCTGGTGTTCCATT-CTTTAGCG-TAAGCGGTTCCGAATTTG-TA 366277
Query 198666 GAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAA 198725
|| ||||| |||||||||||| || || ||||| || || |||| ||| || |
Sbjct 366276 GAAATGTTTGTTGGTGTTGGTCCTTCACGGGTCCGAGATCTATTTGCCGAAGGTCGCAAG 366217
Query 198726 AATCAACCATGTATCATCTTCATTGATGAGATTGACGCTGTTGGTA 198771
||| ||| || ||||| ||||||||||| || || || ||||||
Sbjct 366216 AATGCACCCTGCATCATTTTCATTGATGAAATCGATGCCATTGGTA 366171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657840772773600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |