Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq96 113 7e-20
>seq96
Length=87723
Score = 113 bits (124), Expect = 7e-20
Identities = 197/286 (69%), Gaps = 3/286 (1%)
Strand=Plus/Plus
Query 18422 TCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCT 18481
|| || || || ||||||||||| | ||| || |||| || || || | |||||
Sbjct 52591 TCCTTGATGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATATTCTCCATCATG 52650
Query 18482 ATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCT 18541
||||| || | ||||| | | |||||| || ||| | |||| || | ||
Sbjct 52651 ATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCGCCGCTGAAGCGCTCA 52710
Query 18542 ACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATG 18601
||||| ||||| || || || ||||||| | || || ||||||| || | |||
Sbjct 52711 ACCAAGTTCTCGTTGACAATGCCGTCAGAGGCAGCAAAGAATGCCAGAATGTGGGAGATG 52770
Query 18602 AAATGTTTTTCATTATCCTTGAGA---TTGTTCCATTCATCTATATCTTTTGATAGATCA 18658
|||| ||| |||| || || ||| |||||||| || | | |||||| || |||||
Sbjct 52771 AAATATTTCTCATCGTCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTCGACAGATCG 52830
Query 18659 ACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACATTT 18704
| ||||| | ||||| ||||| | ||||||| |||||||||||
Sbjct 52831 ATCTCTTCGGCCGTCCAGAAAGAAGCCTCGGCCTTTTTGTACATTT 52876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731847939708000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |