Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq96 105 2e-17
seq5 91.5 3e-13
>seq96
Length=87723
Score = 105 bits (116), Expect = 2e-17
Identities = 109/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923
|| ||||||||| || |||||||| ||||| |||||||| | ||||||| |||
Sbjct 52415 GTTGCTTTTGCTGCCGTGGAAGGTATTTTCTTCAGCGGTGCTTTTGCTTCTATCTTCTGG 52356
Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983
|| ||||||||||| |||||||| || ||| | || ||||| |||| |||||| | |||
Sbjct 52355 CTGAAGAAGCGTGGCTTGATGCCCGGTCTCACCTTCTCCAACGAATTAATCTCGCGTGAT 52296
Query 131984 GAAGCATTGCATACTGAATTTGC 132006
|| | |||| || || |||||
Sbjct 52295 GAGGGTCTGCACACAGACTTTGC 52273
>seq5
Length=693879
Score = 91.5 bits (100), Expect = 3e-13
Identities = 217/322 (67%), Gaps = 7/322 (2%)
Strand=Plus/Minus
Query 110689 TTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGA--- 110745
|||| ||| | | || |||||| |||| || | |||||| | || ||||| || |
Sbjct 203761 TTCCCATGCTTCGTGTTTTCAACAACACGGCCAGATATGTCGACCAGGGTGGCAACAAGC 203702
Query 110746 GAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAG 110805
|| |||| | ||||| || || | || |||||||| | ||| | ||||| ||| | |
Sbjct 203701 GACCTGGCGCTTTTGCCATTTACTTGGAGCCTTGGCACGCCGATGTGTTTGAGTTCCTTG 203642
Query 110806 AACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGT 110865
| | || || ||||| || |||||| | || ||||||||||| ||| | |
Sbjct 203641 ATTTGCGAAAGAATCACGGCAAGGAAGAAGTCCGTGCTCGTGATTTATTCCTTGCTCTTT 203582
Query 110866 GGATTTCAGATTTATTCATGAAACGTGTTCAAGAA-AATGGCATGTGGTCTCTTATGTGT 110924
||||| | ||| | |||||||| || | || |||| || || ||| |||| |||||
Sbjct 203581 GGATTCCCGATCTTTTCATGAAGCGCG-TCGAGAAGAACGGTGATTGGACTCTGATGTG- 203524
Query 110925 CCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGA 110983
|| || || | || || || |||| || || | |||||||| | || || ||
Sbjct 203523 CCCCAACGAATGCCCCGGCCTGGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTCTATGA 203464
Query 110984 AAAATATGAAAAAGAAGGCAAG 111005
||| ||||| || ||||||
Sbjct 203463 AAAGTATGAGCGTGAGGGCAAG 203442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186772808117430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |