Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 250 3e-61
>seq5
Length=693879
Score = 250 bits (276), Expect = 3e-61
Identities = 1118/1751 (64%), Gaps = 65/1751 (4%)
Strand=Plus/Plus
Query 117842 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 117901
||||||||| ||||||||||| ||| | |||||| | | ||||| || | | |||
Sbjct 202362 GTAGTACATGCCCGTCTTGAGGCCCAGTTTCCAGCCGGTAAAGTGCATGGAAGTGATCTT 202421
Query 117902 GGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 117961
| | || ||| | |||| | ||| | | ||||| || |||||||| ||
Sbjct 202422 GCCCATAGTGGGATCCTTCATGTGAATGTTAAGAGACTGGGACTGGTCGATGAAAGCACC 202481
Query 117962 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAG 118019
|| || || ||||| | | || | || | || ||||||| ||||| |||||
Sbjct 202482 ACGGTCAGCAGCCATCTGCACGACGTG--TCGTTGAGAAATTTCCCAAACAGTTTTGTAG 202539
Query 118020 AGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACC 118079
|| || || || | ||||| | |||||| || ||||| ||| || | |
Sbjct 202540 AGAGCTTTGATGTCGGCCGGGATGTTGGGGATATTCTGAATGGA---ACCGTTCTCGGCA 202596
Query 118080 ATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGA 118136
|||| | | ||||||| | | ||||| || || || | |||||| | || ||
Sbjct 202597 ATGATACGGTTCTTCATAGCATCAGACCAAAGGCCCATGTCGACGAGATCTTTCAGCAGC 202656
Query 118137 TGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTG 118196
|||||||| || ||||| || ||| || | | || || |||| ||||
Sbjct 202657 CAGGGGTTGACAACCTGGAATTCACCTGCCAGGACACGGCGTTGGTAAATGTTGGACGTG 202716
Query 118197 TATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256
|| ||||| ||||||||||||||||| | || || | || || || || ||||||||
Sbjct 202717 TAAGGCTCGAAGCACTCATTGTTACCTAGAATCTGAGAGGTAGAAGCCGTAGGCATGGGG 202776
Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316
|| | || || ||| || | || | ||| | || | ||||| ||| | |||
Sbjct 202777 GCGAGCAGCAGTGAGTTGCGAATTCCATGCTCCTTGATCTGCTCCTTCAGACTATTCCAC 202836
Query 118317 TCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCT 118376
|| || | | || | | | |||||| |||||||| || || || | ||| ||
Sbjct 202837 TCCCAGAGGTCAGAAGGCTTCACGTCCCACATGTCAAACTGAAGAATGCCCTCGGAGGCG 202896
Query 118377 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG---GAGCTCGCC 118433
|| || |||||||| || || || || | ||| ||||||||| ||| ||
Sbjct 202897 GGAGAGCCCTCAAAGGTAGAGTAAGGTCCTTGCTCCTTGGCCAATTCGACAGAG---GCA 202953
Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 118493
|||||| || || || || || ||||| || | || | | |||||| |
Sbjct 202954 GTGAGGGCAGCATGGTAGATGGTCTCAAATATCTGCTTGTTGAGCTCACGGGCCTCAGGG 203013
Query 118494 GAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 118553
|| ||||| | | || | || || | || |||||||| ||||| || | |||
Sbjct 203014 GACTCAAATGGCATGCGCAAGGCAAGGAAAGCGTCGGCGAGACCCTGGACGCCAACACCA 203073
Query 118554 ATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCG 118613
|| || || |||| ||| || ||||| || || ||||| || || |||
Sbjct 203074 ATCGGCCGGTGTCGCATGTTGCTGTTCCGGGCCTCCTGGACGGGGTAGTGGTTGACATCA 203133
Query 118614 ATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCA 118673
|| | || || || || || |||| |||| || || ||||| | | | ||
Sbjct 203134 ATGATTCTGTTCAGGTTGCGAACAACGACCTGGGTGACCTCGTGGAGCTTCTGGAAGTCG 203193
Query 118674 AAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGCCAGATTACA 118729
| ||| ||| | | | | ||| ||| ||| || | || |||| || ||
Sbjct 203194 TA---GCGTCCCTCGTTGTAGTC-TACGAAGGCAGGCAGAGCCAGAGAGGCCAAGTTGCA 203249
Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789
|||| | |||||| ||| |||||| | |||||||||||| | ||| || ||
Sbjct 203250 AACAGCGACCTCATCAGGGGCAGAGTACTCGACAATTTCCGTGCAAAGGTTGGAGCTGCG 203309
Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849
|| || ||||||||||| || || ||| |||| || ||||||||||| |||||| |
Sbjct 203310 GATTGTTCCCAAGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAA 203369
Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCA 118908
|| | |||||||| || |||| || || || | | ||||| | || | ||||
Sbjct 203370 AGGATTACCCGTCTCTGTCTGGGCCTCCAGGATGGAGTACCAGAGCTTCTG-----GGCA 203424
Query 118909 C-AGTGGCGTTGGCTCGCCCCT---CTTC---CTCGTACTTTGTGTAGAGGGCTTCAAAC 118961
| | ||| | || || |||| | || ||| |||||| ||||| || ||||||
Sbjct 203425 CGAATGG---TCGCACGACCCTTGCCCTCACGCTCATACTTTTCATAGAGAGCCTCAAAC 203481
Query 118962 TCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTG 119020
|| || || | || | || || || || || | ||||| | |||| ||| |
Sbjct 203482 TCCTCGCCGTAGCAGTCAGCCAGGCC-GGGGCATTCGTTGGGGCACATCAGAGTCCAATC 203540
Query 119021 ACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATC 119080
||| || ||| || ||||||||||| || || || ||||| || || ||| | |||
Sbjct 203541 ACCGTTCTTCTCGACGCGCTTCATGAAAAGATCGGGAATCCAAAGAGCAAGGAATAAATC 203600
Query 119081 CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATC 119140
||| || ||||||| | || ||||| ||||| || | || || | | |||
Sbjct 203601 ACGAGCACGGACTTCTTCCTTGCCGTGATTCTTTCGCAAATCAAGGAACTCAAACACATC 203660
Query 119141 CGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTG 119194
|||||||| || |||| ||| | || | | || | | || ||| ||||
Sbjct 203661 GGCGTGCCAAGGCTCCAAGTAAATGGCAAAAGCGCC---AGGTCGCTTGTTGCCACCCTG 203717
Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254
|| ||||| || || ||| ||| || ||||||||||| ||||||| ||||| |||
Sbjct 203718 GTCGACATATCTGGCCGTGTTGTTGAAAACACGAAGCATGGGAATGACACCATTGGACGT 203777
Query 119255 GCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312
|| || || || || || ||| | | |||| | | ||||| | || ||
Sbjct 203778 CCCGTTGGTGCCGGCAATGTAGGAGCC--AGTGGCGCGAATGCGGTGGACATTCAAGCCG 203835
Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372
||||| || ||| ||| ||||| ||||| | |||| || | ||||| || |||
Sbjct 203836 ATACCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCATAGATGCCCTCG 203895
Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCA 119432
|| ||| |||| | ||| ||||||||| ||||| ||| ||||| |||
Sbjct 203896 ATGCTGTCCTCCTTCATGTCGACGAGGAAGCAAGACGACAGCTGACATTGAGGTGTGCCA 203955
Query 119433 GCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACA--TACCTTGGGACATCTTGTCGTAGG 119490
|||||||| || || |||| ||||| |||| | | || |||||| | |||||
Sbjct 203956 GCGTTGAATAGTGTGGGTGAGGCGTGTGTGAAGAGTTTGCT--GGACATGAGATGGTAGG 204013
Query 119491 TCTCCAAGAC---GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
| |||| ||| | | ||||| ||| | || |||| | ||| ||||||| ||
Sbjct 204014 TTTCCAGGACTCGCTCAATATTGTCTCCCCAG---ATCCCGACAGCGACACGCATAATCA 204070
Query 119548 TGTATTGGGGT 119558
||| ||||||
Sbjct 204071 TGTGCTGGGGT 204081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618414868942800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |