Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq82 111 1e-19 >seq82 Length=110760 Score = 111 bits (122), Expect = 1e-19 Identities = 206/300 (69%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121 ||||| ||||| | | |||| || ||||| || |||||||| | ||| || | Sbjct 76332 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 76273 Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACG 30178 ||||| |||| || |||||||||||||| | || |||||| |||| ||| |||| Sbjct 76272 TTCCAAGCGCTCATAATGATGCGCCTGTCGTACGGCTTGTTCTTGATTTTGTCTATCACG 76213 Query 30179 GCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237 || || ||||| || || ||| | || | |||||| | | | ||| || || Sbjct 76212 TCG----GCGAGCTGGTCGACTCCCTTGCCGGCGTAGTCGGTCTTGGCGTCGACATATTC 76157 Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297 ||| || || || | ||| ||||| |||||||| || |||||||| || | || | ||| Sbjct 76156 TGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTG 76097 Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357 | || |||| |||| | || || | || |||||| | ||||| ||||| || || Sbjct 76096 CGTGAGGCCCAGGCTGTCGAGGAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 76037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406297376481960