Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15]
2,630 sequences; 29,374,555 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq82 111 1e-19
>seq82
Length=110760
Score = 111 bits (122), Expect = 1e-19
Identities = 206/300 (69%), Gaps = 8/300 (3%)
Strand=Plus/Minus
Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGG 30121
||||| ||||| | | |||| || ||||| || |||||||| | ||| || |
Sbjct 76332 ACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGCG 76273
Query 30122 TTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CACG 30178
||||| |||| || |||||||||||||| | || |||||| |||| ||| ||||
Sbjct 76272 TTCCAAGCGCTCATAATGATGCGCCTGTCGTACGGCTTGTTCTTGATTTTGTCTATCACG 76213
Query 30179 GCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTC 30237
|| || ||||| || || ||| | || | |||||| | | | ||| || ||
Sbjct 76212 TCG----GCGAGCTGGTCGACTCCCTTGCCGGCGTAGTCGGTCTTGGCGTCGACATATTC 76157
Query 30238 TGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTG 30297
||| || || || | ||| ||||| |||||||| || |||||||| || | || | |||
Sbjct 76156 TGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGTG 76097
Query 30298 CTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30357
| || |||| |||| | || || | || |||||| | ||||| ||||| || ||
Sbjct 76096 CGTGAGGCCCAGGCTGTCGAGGAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGCC 76037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406297376481960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |