Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008035.1_202015-05-15] 2,630 sequences; 29,374,555 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq82 113 3e-20 >seq82 Length=110760 Score = 113 bits (124), Expect = 3e-20 Identities = 207/301 (69%), Gaps = 8/301 (3%) Strand=Plus/Minus Query 27327 TACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGG 27386 |||||| ||||| | | |||| || ||||| || |||||||| | ||| || Sbjct 76333 TACGTAGAACTGGGCGAAGACGTGACAGGGAGGCAGGGCCATGAGATGTAGATCTCGGGC 76274 Query 27387 GTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTC---CAC 27443 |||||| |||| || |||||||||||||| | || |||||| |||| ||| ||| Sbjct 76273 GTTCCAAGCGCTCATAATGATGCGCCTGTCGTACGGCTTGTTCTTGATTTTGTCTATCAC 76214 Query 27444 GGCGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACT 27502 | || || ||||| || || ||| | || | |||||| | | ||| || | Sbjct 76213 GTCG----GCGAGCTGGTCGACTCCCTTGCCGGCGTAGTCGGTCTTGGCGTCGACATATT 76158 Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562 |||| || || || | ||||||||| |||||||| || |||||||| || | || | || Sbjct 76157 CTGCGCCAAAGTGGCGCCATTGGAAGCCGTACACGGGACCCAGGTCGCCTACCTCGCGGT 76098 Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 || || |||| |||| | || || | || |||||| | ||||| ||||| || | Sbjct 76097 GCGTGAGGCCCAGGCTGTCGAGGAACTCGCGCGATCCGTTGCCATCCCATATCTTGACGC 76038 Query 27623 C 27623 | Sbjct 76037 C 76037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369495356139530