Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq103 129 1e-24
>seq103
Length=87482
Score = 129 bits (142), Expect = 1e-24
Identities = 188/266 (71%), Gaps = 0/266 (0%)
Strand=Plus/Plus
Query 230372 AGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACG 230431
||| | || |||| || |||||||| || || | ||| || ||||| | ||| |
Sbjct 35321 AGATGATCCAACAGATTATTACAGATGCTGTCACCATCGAGAAAGAGTTTCTGACTGAGG 35380
Query 230432 CTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCG 230491
|| | |||||| || |||||||||| || | | ||| ||||||||| || || |
Sbjct 35381 CTTTGCCATGTGCTCTACTTGGCATGAATGCCACATTGATGAAACAGTACATTGAGTTTG 35440
Query 230492 TAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCT 230551
||||||| ||| | ||||||| |||||| | ||||| |||||||| | || || |
Sbjct 35441 TAGCCGATCGCCTGCTTGTTGCTCTTGGTAATGAGAAGGTGTACAAGACGGCTAATCCTT 35500
Query 230552 TTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCA 230611
||| || |||||| ||| || | || ||||| ||||||||||| || || ||
Sbjct 35501 TTGACTTCATGGAGAACATCTCATTGGGTGGCAAGACAAACTTCTTCGAGAAACGAGTGG 35560
Query 230612 GTGACTATCAGAGGCCTGGTGTGATG 230637
|||| || |||| | ||||||| |||
Sbjct 35561 GTGAGTACCAGAAGGCTGGTGTCATG 35586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057786958639790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |