Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq103 105 7e-18
>seq103
Length=87482
Score = 105 bits (116), Expect = 7e-18
Identities = 196/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || ||||| | || ||| |||| ||||| || |||||||| |||||
Sbjct 34955 ATGTAGGTGTCGATTAAGAGAGAGTATGTTTCCGAGTGGATATTCTCCATCATGATCTGG 34896
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|||||||||||||| || || || | | ||| ||||| || ||| || || | |
Sbjct 34895 AATCCGTAAAAGCAACGAGCCTCAGGGACTTGGACTTCGCCGCTGAAGCGCTCAACCAAG 34836
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413
|| ||||| || |||||||| || || || || |||| || || |||||||||
Sbjct 34835 TTCTCGTTGACAATGCCGTCAGAGGCAGCAAAGAATGCCAGAATGTGGGAGATGAAATAT 34776
Query 17414 TT---TTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470
|| ||||| | || | |||||| | |||||||| || | ||| | |||
Sbjct 34775 TTCTCATCGTCATTCAGACGATTGTTCCAGTCGTGCAAATCTTTCGACAGATCGATCTCT 34716
Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|||| ||||| ||| |||| | |||||||| ||||| | ||| ||
Sbjct 34715 TCGGCCGTCCAGAAAGAAGCCTCGGCCTTTTTGTACATTTGCCAGAT 34669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517527919348440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |