Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq68 84.2 1e-11 >seq68 Length=142692 Score = 84.2 bits (92), Expect = 1e-11 Identities = 121/169 (72%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 12780 AATGGTCAT--GCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCA 12837 ||| ||||| ||||| |||| || ||||| || ||||| | |||||| | || Sbjct 29646 AATTGTCATTCGCGAC--GGAATAGCGTGTGGATTGATGATGATGTCAGGTGTGACACCT 29703 Query 12838 TCTTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCG 12897 ||| |||||| ||||||| ||||| ||| | | |||| |||||| |||||| || Sbjct 29704 TCTCGAGTGAACGGCATGTCCTCTTGTCGGTAAGTGACACCAATGGTACCCTTTTGTCCG 29763 Query 12898 GTAAAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTA 12946 | ||||||||||||||| || |||| ||| || || | | ||||| Sbjct 29764 TGACGAGAAGCAAATTTATCACCAATTTGAGGAATCTTCGTCGTTCGTA 29812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328353862681582