Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_001824.1
Length=102653
Score E
Sequences producing significant alignments: (Bits) Value
seq68 84.2 1e-11
>seq68
Length=142692
Score = 84.2 bits (92), Expect = 1e-11
Identities = 121/169 (72%), Gaps = 4/169 (2%)
Strand=Plus/Plus
Query 12780 AATGGTCAT--GCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCA 12837
||| ||||| ||||| |||| || ||||| || ||||| | |||||| | ||
Sbjct 29646 AATTGTCATTCGCGAC--GGAATAGCGTGTGGATTGATGATGATGTCAGGTGTGACACCT 29703
Query 12838 TCTTTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCG 12897
||| |||||| ||||||| ||||| ||| | | |||| |||||| |||||| ||
Sbjct 29704 TCTCGAGTGAACGGCATGTCCTCTTGTCGGTAAGTGACACCAATGGTACCCTTTTGTCCG 29763
Query 12898 GTAAAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTA 12946
| ||||||||||||||| || |||| ||| || || | | |||||
Sbjct 29764 TGACGAGAAGCAAATTTATCACCAATTTGAGGAATCTTCGTCGTTCGTA 29812
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328353862681582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |