Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq103 96.9 3e-15
>seq103
Length=87482
Score = 96.9 bits (106), Expect = 3e-15
Identities = 177/259 (68%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 16533 TTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATA 16592
|||| || || ||||||||||| ||||| || || |||||||| | ||| || | |
Sbjct 34927 TTTCCGAGTGGATATTCTCCATCATGATCTGGAATCCGTAAAAGCAACGAGCCTCAGGGA 34868
Query 16593 TTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTG 16652
||| ||||| | || | || | ||||| ||||| || || || || || |
Sbjct 34867 CTTGGACTTCGCCGCTGAAGCGCTCAACCAAGTTCTCGTTGACAATGCCGTCAGAGGCAG 34808
Query 16653 CAAAAAACGCAAGTATGTGTTTAATAAAAttttt---ttCGTTATCTGAAAGTTTTAACC 16709
|||| || || || ||||| || |||| ||| |||| || | | || ||
Sbjct 34807 CAAAGAATGCCAGAATGTGGGAGATGAAATATTTCTCATCGTCATTCAGACGATTGTTCC 34748
Query 16710 AGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCT 16769
|||| |||||||| || | ||||| |||||| | ||||| |||||||| | ||||
Sbjct 34747 AGTCGTGCAAATCTTTCGACAGATCGATCTCTTCGGCCGTCCAGAAAGAAGCCTCGGCCT 34688
Query 16770 TTTTATACATTTTCCATAT 16788
|||| ||||||| ||| ||
Sbjct 34687 TTTTGTACATTTGCCAGAT 34669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462496199433800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |