Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 7e-15 >seq5 Length=634825 Score = 96.9 bits (106), Expect = 7e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| |||||| | | || | || ||||||||||| |||||||| || |||||||| || Sbjct 353378 CCTCCCTCATCTTTTGTTATATGGCCCTCCCGGAACGGGCAAGACATCCACCATCCTCGC 353319 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || |||||| ||| || | | |||||| | || ||||| ||||| ||||| Sbjct 353318 CCTCGCCCGACGAATGTACGGAGCCGCTAACATGCGGCAGATGGTGCTGGAGCTCAACGC 353259 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCA 254172 || ||||| || || | ||||| || ||||| | |||||||| ||| ||| Sbjct 353258 CTCCGACGACCGAGGTATCGACGTGGTGCGCGAACAAATCAAGACGTTCGCCA 353206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073728800391744