Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq103 102 6e-17 >seq103 Length=87482 Score = 102 bits (112), Expect = 6e-17 Identities = 133/179 (74%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 23005 CTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATACAGTTTGTTGCAGATCGCCT 23063 |||||||| |||||| | ||| | |||| || |||||| ||||||| || |||||||| Sbjct 35395 CTACTTGGCATGAAT-GCCACATTGATGAAACAGTACATTGAGTTTGTAGCCGATCGCCT 35453 Query 23064 GCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAATCCATTTGATTTCATGGA 23123 ||| | ||| || ||| ||| ||| |||| || || ||||| ||||| |||||||| Sbjct 35454 GCTTGTTGCTCTTGGTAATGAGAAGGTGTACAAGACGGCTAATCCTTTTGACTTCATGGA 35513 Query 23124 TAACATTAGCATT-GAAGGTAAAACAAACTTCTTTGAACGCCGTGTGAGTGAATATCAG 23181 |||| | |||| | || || ||||||||||| || || ||| |||| || ||| Sbjct 35514 GAACA-TCTCATTGGGTGGCAAGACAAACTTCTTCGAGAAACGAGTGGGTGAGTACCAG 35571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356221734415399