Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 8e-16
>seq6
Length=626929
Score = 98.7 bits (108), Expect = 8e-16
Identities = 165/237 (70%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||| | | ||| || || || ||||||||||| || |||||||| || ||
Sbjct 11347 ACCACCACGCAGGCGCAGCACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGC 11406
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | ||||| |||||||| || | | || | |||||||| || ||
Sbjct 11407 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCTGGGGG 11466
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676
| | ||||||||| ||||| ||||| | | || ||||| |||| |||||||
Sbjct 11467 GATGCCCTCCTTGTCCTGGATTTTGGACTTGACGTTGTCG--ATGGTGTCGGAAGACTCC 11524
Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
||||| || || || || || ||||| || || || |||||||||||| || ||
Sbjct 11525 ACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 11581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421237168780733
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |