Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15]
2,733 sequences; 29,314,310 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq70 167 4e-37
>seq70
Length=140514
Score = 167 bits (184), Expect = 4e-37
Identities = 200/269 (74%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||| | ||| |||||| || ||||||||||| ||||||||||| |||||
Sbjct 2210 GCCAAGCGTCATCGTAAGAT-TCTTCGCGACAACATCCAAGGCATCACCAAGCCTGCTAT 2152
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
||| ||||| || ||||||||||| || || ||| |||||| || |||| || || |
Sbjct 2151 CCGACGTCTCGCCCGTCGTGGTGGTGTTAAACGTATCTCTGCTATGATCTACGAGGAAAC 2092
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|| |||| | |||| ||||| || ||| |||| ||| || || || || ||
Sbjct 2091 ACGCAATGTCCTTAAGACATTCCTTGAGGGCGTCATCCGTGACGCCGTCACATACACAGA 2032
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || || ||||| ||||| || | ||| | || ||||| || || ||||||||
Sbjct 2031 ACACGCCAAGCGAAAGACGGTCACATCTCTTGATGTTGTATATGCCTTAAAGCGTCAAGG 1972
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|||| | | || || ||||| | ||||
Sbjct 1971 TCGTACGCTATACGGCTTTGGTGGCTAAT 1943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072701198969
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |