Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atkinsonella_20texensis_20[genbank_20GCA_5F001008105.1_202015-05-15] 2,733 sequences; 29,314,310 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq70 167 4e-37 >seq70 Length=140514 Score = 167 bits (184), Expect = 4e-37 Identities = 200/269 (74%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||| | ||| |||||| || ||||||||||| ||||||||||| ||||| Sbjct 2210 GCCAAGCGTCATCGTAAGAT-TCTTCGCGACAACATCCAAGGCATCACCAAGCCTGCTAT 2152 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || ||||||||||| || || ||| |||||| || |||| || || | Sbjct 2151 CCGACGTCTCGCCCGTCGTGGTGGTGTTAAACGTATCTCTGCTATGATCTACGAGGAAAC 2092 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || |||| | |||| ||||| || ||| |||| ||| || || || || || Sbjct 2091 ACGCAATGTCCTTAAGACATTCCTTGAGGGCGTCATCCGTGACGCCGTCACATACACAGA 2032 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || || ||||| ||||| || | ||| | || ||||| || || |||||||| Sbjct 2031 ACACGCCAAGCGAAAGACGGTCACATCTCTTGATGTTGTATATGCCTTAAAGCGTCAAGG 1972 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 |||| | | || || ||||| | |||| Sbjct 1971 TCGTACGCTATACGGCTTTGGTGGCTAAT 1943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072701198969